Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 MIPEPP3-201ENST00000412105 444 ntBASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 AC244517.3-201ENST00000616254 1235 ntBASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB13Q9Y5F0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 GUSBP6-202ENST00000438529 1198 ntBASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHB13Q9Y5F0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 AL109923.1-201ENST00000618799 583 ntBASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHB13Q9Y5F0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 AC120057.1-201ENST00000483947 663 ntBASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHB13Q9Y5F0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 C2orf69P4-201ENST00000565394 541 ntBASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 AC073130.3-201ENST00000624389 2278 ntBASIC22.27■■□□□ 1.16
PCDHB13Q9Y5F0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHB13Q9Y5F0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms