Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 AC069544.1-201ENST00000609399 999 ntBASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 FP700111.2-201ENST00000619190 1892 ntBASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00588Q9Y4M8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 AC006128.1-201ENST00000624704 1661 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 AC093827.2-201ENST00000512654 315 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 C1QBPP2-201ENST00000528754 825 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 AL121603.2-201ENST00000557373 2117 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 AC120498.8-201ENST00000614275 531 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 CLDN5-201ENST00000403084 2357 ntBASIC13.86□□□□□ -0.19
LINC00588Q9Y4M8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AC005229.4-201ENST00000610085 2198 ntBASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 RN7SL471P-201ENST00000580476 299 ntBASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AL359736.2-201ENST00000621992 437 ntBASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 AP006294.2-201ENST00000641667 209 ntBASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00588Q9Y4M8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC00588Q9Y4M8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms