Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSX2IPQ9Y2D8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSX2IPQ9Y2D8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 Z99916.2-201ENST00000604037 246 ntBASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 MTDHP1-201ENST00000605323 784 ntBASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSX2IPQ9Y2D8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 AC133681.1-201ENST00000465482 601 ntBASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 AP001412.1-201ENST00000608405 714 ntBASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 AL137060.1-201ENST00000618151 2648 ntBASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SSX2IPQ9Y2D8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 AC012618.2-201ENST00000428058 849 ntBASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SSX2IPQ9Y2D8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SSX2IPQ9Y2D8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms