Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 KRT19P1-201ENST00000405746 1186 ntBASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 AC061975.6-201ENST00000579045 1553 ntBASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC004408.2-201ENST00000623613 2777 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC020907.5-201ENST00000624372 1936 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AP001160.3-201ENST00000601484 763 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AL162377.1-201ENST00000618844 1793 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 PLK5-205ENST00000642079 1969 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 AC004854.2-201ENST00000608450 1441 ntBASIC14.74□□□□□ -0.05
HHLA3Q9XRX5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AC010141.2-201ENST00000452426 721 ntBASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 NTF6G-201ENST00000591094 616 ntBASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HHLA3Q9XRX5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HHLA3Q9XRX5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms