Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL355075.4-201ENST00000554988 638 ntBASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 AP001412.1-201ENST00000608405 714 ntBASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHANK2Q9UPX8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 KRT16P5-201ENST00000455284 522 ntBASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SHANK2Q9UPX8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC30.29■■■□□ 2.44
SHANK2Q9UPX8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SHANK2Q9UPX8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC30.28■■■□□ 2.44
SHANK2Q9UPX8 AL031963.3-201ENST00000606441 850 ntBASIC30.28■■■□□ 2.44
SHANK2Q9UPX8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC30.28■■■□□ 2.44
SHANK2Q9UPX8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SHANK2Q9UPX8 FBXW4P1-201ENST00000426721 2239 ntBASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC30.27■■■□□ 2.44
SHANK2Q9UPX8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 AL353807.1-201ENST00000427475 662 ntBASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.26■■■□□ 2.44
SHANK2Q9UPX8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
SHANK2Q9UPX8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SHANK2Q9UPX8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.26■■■□□ 2.43
SHANK2Q9UPX8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 AC012306.2-201ENST00000609350 630 ntBASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.25■■■□□ 2.43
SHANK2Q9UPX8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 AF186192.3-201ENST00000583427 947 ntBASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms