Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 LINC02228-203ENST00000641970 1355 ntBASIC17.98■□□□□ 0.47
COPS3Q9UNS2 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.98■□□□□ 0.47
COPS3Q9UNS2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COPS3Q9UNS2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 AL020996.1-203ENST00000536896 2307 ntBASIC17.97■□□□□ 0.47
COPS3Q9UNS2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 AC091799.1-201ENST00000422823 811 ntBASIC17.97■□□□□ 0.47
COPS3Q9UNS2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COPS3Q9UNS2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 AC005837.3-201ENST00000612163 286 ntBASIC17.96■□□□□ 0.47
COPS3Q9UNS2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COPS3Q9UNS2 AL158211.5-201ENST00000623583 2518 ntBASIC17.96■□□□□ 0.47
COPS3Q9UNS2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 DPP3P2-201ENST00000416030 1696 ntBASIC17.95■□□□□ 0.46
COPS3Q9UNS2 KRT8P36-201ENST00000489121 1440 ntBASIC17.95■□□□□ 0.46
COPS3Q9UNS2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COPS3Q9UNS2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 CCDC92B-201ENST00000575506 885 ntBASIC17.94■□□□□ 0.46
COPS3Q9UNS2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
COPS3Q9UNS2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms