Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIN7CQ9NUP9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 KRT18P20-201ENST00000548986 1279 ntBASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 AP001160.3-201ENST00000601484 763 ntBASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 AC120498.10-201ENST00000621827 505 ntBASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIN7CQ9NUP9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 KRT18P11-201ENST00000435214 1283 ntBASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 AC137761.2-201ENST00000561729 223 ntBASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 AC145350.3-201ENST00000569033 163 ntBASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
LIN7CQ9NUP9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIN7CQ9NUP9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 KRT16P2-201ENST00000414673 1423 ntBASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 AC016769.1-201ENST00000409132 1010 ntBASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 AC022517.1-201ENST00000592429 346 ntBASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIN7CQ9NUP9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms