Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
ZCCHC3Q9NUD5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 CNN2P6-201ENST00000439038 900 ntBASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 AL356652.1-201ENST00000615962 565 ntBASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZCCHC3Q9NUD5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 DPP3P2-201ENST00000416030 1696 ntBASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZCCHC3Q9NUD5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 AC068338.2-201ENST00000563278 1430 ntBASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZCCHC3Q9NUD5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 AIRN-201ENST00000601203 4374 ntBASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 RARRES2P4-201ENST00000514074 484 ntBASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.96■□□□□ 0.63
ZCCHC3Q9NUD5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms