Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KLHL1Q9NR64 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.96■□□□□ 0.63
KLHL1Q9NR64 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL1Q9NR64 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 KRT17P1-201ENST00000399211 1546 ntBASIC18.95■□□□□ 0.62
KLHL1Q9NR64 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
KLHL1Q9NR64 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 AL049796.1-201ENST00000565336 1766 ntBASIC18.94■□□□□ 0.62
KLHL1Q9NR64 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 KRT18P29-201ENST00000397031 1267 ntBASIC18.94■□□□□ 0.62
KLHL1Q9NR64 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 AC007322.3-201ENST00000426526 701 ntBASIC18.94■□□□□ 0.62
KLHL1Q9NR64 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.94■□□□□ 0.62
KLHL1Q9NR64 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 CYP2T3P-201ENST00000601990 817 ntBASIC18.93■□□□□ 0.62
KLHL1Q9NR64 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
KLHL1Q9NR64 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL1Q9NR64 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms