Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ELL3Q9HB65 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.59■□□□□ 0.41
ELL3Q9HB65 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.59■□□□□ 0.41
ELL3Q9HB65 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ELL3Q9HB65 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.59■□□□□ 0.41
ELL3Q9HB65 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ELL3Q9HB65 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ELL3Q9HB65 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ELL3Q9HB65 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ELL3Q9HB65 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ELL3Q9HB65 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.58■□□□□ 0.41
ELL3Q9HB65 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ELL3Q9HB65 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
ELL3Q9HB65 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 AC034268.1-201ENST00000441047 882 ntBASIC17.58■□□□□ 0.4
ELL3Q9HB65 AC245052.3-201ENST00000450182 901 ntBASIC17.58■□□□□ 0.4
ELL3Q9HB65 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ELL3Q9HB65 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.58■□□□□ 0.4
ELL3Q9HB65 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 HTR7P1-202ENST00000624664 4411 ntBASIC17.57■□□□□ 0.4
ELL3Q9HB65 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.57■□□□□ 0.4
ELL3Q9HB65 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ELL3Q9HB65 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 AC112907.3-201ENST00000577781 2400 ntBASIC17.57■□□□□ 0.4
ELL3Q9HB65 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ELL3Q9HB65 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 AC104187.1-201ENST00000607510 612 ntBASIC17.56■□□□□ 0.4
ELL3Q9HB65 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ELL3Q9HB65 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
ELL3Q9HB65 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 NTF6G-201ENST00000591094 616 ntBASIC17.55■□□□□ 0.4
ELL3Q9HB65 MIR5787-201ENST00000611784 55 ntBASIC17.55■□□□□ 0.4
ELL3Q9HB65 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms