Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS16Q9H269 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS16Q9H269 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
VPS16Q9H269 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
VPS16Q9H269 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
VPS16Q9H269 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
VPS16Q9H269 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS16Q9H269 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
VPS16Q9H269 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
VPS16Q9H269 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS16Q9H269 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS16Q9H269 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS16Q9H269 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS16Q9H269 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS16Q9H269 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS16Q9H269 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS16Q9H269 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS16Q9H269 UBE2DNL-204ENST00000602536 740 ntBASIC22.17■■□□□ 1.14
VPS16Q9H269 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
VPS16Q9H269 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS16Q9H269 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
VPS16Q9H269 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
VPS16Q9H269 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
VPS16Q9H269 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS16Q9H269 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS16Q9H269 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS16Q9H269 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS16Q9H269 AL158211.5-201ENST00000623583 2518 ntBASIC22.16■■□□□ 1.14
VPS16Q9H269 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS16Q9H269 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS16Q9H269 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS16Q9H269 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS16Q9H269 AL691432.2-201ENST00000607222 2038 ntBASIC22.16■■□□□ 1.14
VPS16Q9H269 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS16Q9H269 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS16Q9H269 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS16Q9H269 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
VPS16Q9H269 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS16Q9H269 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS16Q9H269 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS16Q9H269 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 KRT19P1-201ENST00000405746 1186 ntBASIC22.15■■□□□ 1.14
VPS16Q9H269 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS16Q9H269 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS16Q9H269 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS16Q9H269 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS16Q9H269 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
VPS16Q9H269 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS16Q9H269 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.14■■□□□ 1.14
VPS16Q9H269 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
VPS16Q9H269 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.14■■□□□ 1.13
VPS16Q9H269 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.14■■□□□ 1.13
VPS16Q9H269 FAM21FP-204ENST00000608637 956 ntBASIC22.14■■□□□ 1.13
VPS16Q9H269 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
VPS16Q9H269 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
VPS16Q9H269 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS16Q9H269 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS16Q9H269 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS16Q9H269 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS16Q9H269 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
VPS16Q9H269 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 CDV3P1-201ENST00000471403 739 ntBASIC22.13■■□□□ 1.13
VPS16Q9H269 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS16Q9H269 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
VPS16Q9H269 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms