Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 PTBP1P-201ENST00000554374 1601 ntBASIC20.17■□□□□ 0.82
HDAC8Q9BY41 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 FP700111.2-201ENST00000619190 1892 ntBASIC20.17■□□□□ 0.82
HDAC8Q9BY41 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC8Q9BY41 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC8Q9BY41 AC007225.1-201ENST00000566331 1836 ntBASIC20.16■□□□□ 0.82
HDAC8Q9BY41 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 HLA-G-202ENST00000376815 851 ntBASIC20.15■□□□□ 0.82
HDAC8Q9BY41 HLA-G-203ENST00000376818 1127 ntBASIC20.15■□□□□ 0.82
HDAC8Q9BY41 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 AC133681.1-201ENST00000465482 601 ntBASIC20.15■□□□□ 0.82
HDAC8Q9BY41 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC8Q9BY41 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC8Q9BY41 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC8Q9BY41 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC8Q9BY41 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC8Q9BY41 AC008550.1-201ENST00000511500 884 ntBASIC20.13■□□□□ 0.81
HDAC8Q9BY41 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms