Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 SERP1-208ENST00000491660 830 ntTSL 2 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 TESC-206ENST00000541210 936 ntTSL 3 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 TERF1P2-201ENST00000583350 1212 ntBASIC11.99□□□□□ -0.49
LIMD2Q9BT23 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LIMD2Q9BT23 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 AC010141.2-201ENST00000452426 721 ntBASIC11.98□□□□□ -0.49
LIMD2Q9BT23 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 KRT18P20-201ENST00000548986 1279 ntBASIC11.98□□□□□ -0.49
LIMD2Q9BT23 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC11.98□□□□□ -0.49
LIMD2Q9BT23 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 OR6D1P-202ENST00000641007 5290 ntBASIC11.97□□□□□ -0.49
LIMD2Q9BT23 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 KRT19P1-201ENST00000405746 1186 ntBASIC11.97□□□□□ -0.49
LIMD2Q9BT23 CCDC92B-201ENST00000575506 885 ntBASIC11.97□□□□□ -0.49
LIMD2Q9BT23 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms