Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YIPF4Q9BSR8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19■□□□□ 0.63
YIPF4Q9BSR8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YIPF4Q9BSR8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19■□□□□ 0.63
YIPF4Q9BSR8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.99■□□□□ 0.63
YIPF4Q9BSR8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 FAM21FP-204ENST00000608637 956 ntBASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 AL162377.1-201ENST00000618844 1793 ntBASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.98■□□□□ 0.63
YIPF4Q9BSR8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 CNN2P6-201ENST00000439038 900 ntBASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 AC099778.1-201ENST00000568593 1911 ntBASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 KRT8P36-201ENST00000489121 1440 ntBASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
YIPF4Q9BSR8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 AC073111.5-205ENST00000641717 521 ntBASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YIPF4Q9BSR8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YIPF4Q9BSR8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms