Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USB1Q9BQ65 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USB1Q9BQ65 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.96■□□□□ 0.47
USB1Q9BQ65 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USB1Q9BQ65 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USB1Q9BQ65 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.96■□□□□ 0.47
USB1Q9BQ65 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USB1Q9BQ65 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
USB1Q9BQ65 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.96■□□□□ 0.46
USB1Q9BQ65 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.96■□□□□ 0.46
USB1Q9BQ65 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
USB1Q9BQ65 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 AC120057.1-201ENST00000483947 663 ntBASIC17.95■□□□□ 0.46
USB1Q9BQ65 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 AC098934.4-201ENST00000564127 592 ntBASIC17.95■□□□□ 0.46
USB1Q9BQ65 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 TMEM191A-211ENST00000637163 1067 ntBASIC17.95■□□□□ 0.46
USB1Q9BQ65 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.95■□□□□ 0.46
USB1Q9BQ65 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USB1Q9BQ65 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 AC005229.4-201ENST00000610085 2198 ntBASIC17.94■□□□□ 0.46
USB1Q9BQ65 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 ABHD17AP1-201ENST00000358206 933 ntBASIC17.94■□□□□ 0.46
USB1Q9BQ65 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
USB1Q9BQ65 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USB1Q9BQ65 AC138932.1-201ENST00000534164 6830 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 AC087633.2-202ENST00000565166 1439 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 RNA5SP413-201ENST00000516373 109 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 AC083880.1-201ENST00000608266 535 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 AC244517.3-201ENST00000616254 1235 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 HLA-B-256ENST00000639848 1089 ntBASIC17.93■□□□□ 0.46
USB1Q9BQ65 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
USB1Q9BQ65 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USB1Q9BQ65 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms