Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 CYP2T1P-201ENST00000432607 1285 ntBASIC18.68■□□□□ 0.58
TM9SF2Q99805 AL162412.1-201ENST00000567129 965 ntBASIC18.68■□□□□ 0.58
TM9SF2Q99805 AC142086.2-201ENST00000569753 217 ntBASIC18.68■□□□□ 0.58
TM9SF2Q99805 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 AC006128.1-201ENST00000624704 1661 ntBASIC18.68■□□□□ 0.58
TM9SF2Q99805 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF2Q99805 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF2Q99805 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 RBM17P2-201ENST00000616397 1405 ntBASIC18.67■□□□□ 0.58
TM9SF2Q99805 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF2Q99805 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF2Q99805 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 AL591742.1-201ENST00000604433 565 ntBASIC18.66■□□□□ 0.58
TM9SF2Q99805 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PLK5-205ENST00000642079 1969 ntBASIC18.66■□□□□ 0.58
TM9SF2Q99805 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF2Q99805 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.66■□□□□ 0.58
TM9SF2Q99805 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 GUSBP6-202ENST00000438529 1198 ntBASIC18.65■□□□□ 0.58
TM9SF2Q99805 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TM9SF2Q99805 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.65■□□□□ 0.58
TM9SF2Q99805 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF2Q99805 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms