Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BID-214ENST00000617586 542 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.73■□□□□ 0.75
NPAS2Q99743 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NPAS2Q99743 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS2Q99743 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
NPAS2Q99743 AC011484.1-201ENST00000377652 1995 ntBASIC19.73■□□□□ 0.75
NPAS2Q99743 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS2Q99743 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.72■□□□□ 0.75
NPAS2Q99743 TCF3P1-201ENST00000423021 1937 ntBASIC19.72■□□□□ 0.75
NPAS2Q99743 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS2Q99743 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NPAS2Q99743 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.72■□□□□ 0.75
NPAS2Q99743 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.72■□□□□ 0.75
NPAS2Q99743 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
NPAS2Q99743 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS2Q99743 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS2Q99743 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
NPAS2Q99743 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS2Q99743 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 SMG8-203ENST00000578922 2178 ntBASIC19.71■□□□□ 0.75
NPAS2Q99743 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NPAS2Q99743 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 AP001160.3-201ENST00000601484 763 ntBASIC19.71■□□□□ 0.75
NPAS2Q99743 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 AL020996.1-203ENST00000536896 2307 ntBASIC19.71■□□□□ 0.75
NPAS2Q99743 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS2Q99743 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
NPAS2Q99743 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
NPAS2Q99743 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NPAS2Q99743 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.7■□□□□ 0.74
NPAS2Q99743 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.7■□□□□ 0.74
NPAS2Q99743 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.7■□□□□ 0.74
NPAS2Q99743 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.7■□□□□ 0.74
NPAS2Q99743 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 MFSD11-216ENST00000590393 1141 ntBASIC19.7■□□□□ 0.74
NPAS2Q99743 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS2Q99743 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS2Q99743 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 AC116562.4-201ENST00000641316 2276 ntBASIC19.69■□□□□ 0.74
NPAS2Q99743 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
NPAS2Q99743 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPAS2Q99743 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NPAS2Q99743 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NPAS2Q99743 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
NPAS2Q99743 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.69■□□□□ 0.74
NPAS2Q99743 KRT18P11-201ENST00000435214 1283 ntBASIC19.69■□□□□ 0.74
NPAS2Q99743 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.69■□□□□ 0.74
NPAS2Q99743 UBE2DNL-204ENST00000602536 740 ntBASIC19.69■□□□□ 0.74
NPAS2Q99743 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.69■□□□□ 0.74
NPAS2Q99743 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NPAS2Q99743 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS2Q99743 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NPAS2Q99743 AC092720.2-201ENST00000602388 1665 ntBASIC19.68■□□□□ 0.74
NPAS2Q99743 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS2Q99743 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms