Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NOTCH4Q99466 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NOTCH4Q99466 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.01■□□□□ 0.95
NOTCH4Q99466 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOTCH4Q99466 NBPF21P-201ENST00000425093 1451 ntBASIC21.01■□□□□ 0.95
NOTCH4Q99466 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOTCH4Q99466 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NOTCH4Q99466 RN7SL850P-201ENST00000579959 291 ntBASIC21■□□□□ 0.95
NOTCH4Q99466 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21■□□□□ 0.95
NOTCH4Q99466 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21■□□□□ 0.95
NOTCH4Q99466 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
NOTCH4Q99466 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21■□□□□ 0.95
NOTCH4Q99466 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21■□□□□ 0.95
NOTCH4Q99466 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 AC010331.1-201ENST00000611423 582 ntBASIC21■□□□□ 0.95
NOTCH4Q99466 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NOTCH4Q99466 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NOTCH4Q99466 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 KRT18P21-201ENST00000515767 1272 ntBASIC20.99■□□□□ 0.95
NOTCH4Q99466 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NOTCH4Q99466 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 AP003071.4-201ENST00000562276 1284 ntBASIC20.99■□□□□ 0.95
NOTCH4Q99466 AF186192.3-201ENST00000583427 947 ntBASIC20.99■□□□□ 0.95
NOTCH4Q99466 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.99■□□□□ 0.95
NOTCH4Q99466 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NOTCH4Q99466 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.98■□□□□ 0.95
NOTCH4Q99466 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.98■□□□□ 0.95
NOTCH4Q99466 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NOTCH4Q99466 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 CD177P1-201ENST00000606252 935 ntBASIC20.97■□□□□ 0.95
NOTCH4Q99466 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.97■□□□□ 0.95
NOTCH4Q99466 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NOTCH4Q99466 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
NOTCH4Q99466 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.96■□□□□ 0.95
NOTCH4Q99466 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.96■□□□□ 0.95
NOTCH4Q99466 REXO1L10P-201ENST00000615707 1290 ntBASIC20.96■□□□□ 0.95
NOTCH4Q99466 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOTCH4Q99466 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 AL353807.1-201ENST00000427475 662 ntBASIC20.95■□□□□ 0.94
NOTCH4Q99466 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms