Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 SDH2YLL041C 801 nt-0.08□□□□□ -2.42
TY1B-DR3Q99231 YLR031WYLR031W 561 nt-0.08□□□□□ -2.42
TY1B-DR3Q99231 AIM44YPL158C 2277 nt-0.08□□□□□ -2.42
TY1B-DR3Q99231 YPL060C-AYPL060C-A 3315 nt-0.09□□□□□ -2.42
TY1B-DR3Q99231 YOL024WYOL024W 519 nt-0.09□□□□□ -2.42
TY1B-DR3Q99231 YOR199WYOR199W 330 nt-0.09□□□□□ -2.42
TY1B-DR3Q99231 NPR2YEL062W 1848 nt-0.09□□□□□ -2.42
TY1B-DR3Q99231 VAB2YEL005C 849 nt-0.09□□□□□ -2.42
TY1B-DR3Q99231 YAL064WYAL064W 285 nt-0.1□□□□□ -2.43
TY1B-DR3Q99231 ROX1YPR065W 1107 nt-0.1□□□□□ -2.43
TY1B-DR3Q99231 ENV11YGR071C 2583 nt-0.1□□□□□ -2.43
TY1B-DR3Q99231 SWI5YDR146C 2130 nt-0.1□□□□□ -2.43
TY1B-DR3Q99231 BFR2YDR299W 1605 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 YMR173W-AYMR173W-A 1185 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 DDR48YMR173W 1293 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 SAG1YJR004C 1953 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 TIM8YJR135W-A 264 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 ATP18YML081C-A 180 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 DLT1YMR126C 1029 nt-0.11□□□□□ -2.43
TY1B-DR3Q99231 STO1YMR125W 2586 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 NOC3YLR002C 1992 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 SSS1YDR086C 243 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 YHL048C-AYHL048C-A 135 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 RPC10YHR143W-A 213 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 COX12YLR038C 252 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 YLR232WYLR232W 348 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 YBR076C-AYBR076C-A 267 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 NTC20YBR188C 423 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 CHS6YJL099W 2241 nt-0.12□□□□□ -2.43
TY1B-DR3Q99231 CHZ1YER030W 462 nt-0.13□□□□□ -2.43
TY1B-DR3Q99231 YER046W-AYER046W-A 330 nt-0.13□□□□□ -2.43
TY1B-DR3Q99231 YLR311CYLR311C 348 nt-0.13□□□□□ -2.43
TY1B-DR3Q99231 SPR2YOR214C 711 nt-0.13□□□□□ -2.43
TY1B-DR3Q99231 PEP3YLR148W 2757 nt-0.13□□□□□ -2.43
TY1B-DR3Q99231 NIP100YPL174C 2607 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YDR262WYDR262W 819 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YJL007CYJL007C 315 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YKL183C-AYKL183C-A 213 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YBP2YGL060W 1926 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YCR016WYCR016W 873 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 YPR153WYPR153W 423 nt-0.14□□□□□ -2.43
TY1B-DR3Q99231 PRP5YBR237W 2550 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 MET32YDR253C 576 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 SLD5YDR489W 885 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 MAM1YER106W 909 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 YOR108C-AYOR108C-A 210 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 AEP1YMR064W 1557 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 PDE2YOR360C 1581 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 IPI3YNL182C 1668 nt-0.15□□□□□ -2.43
TY1B-DR3Q99231 YGR204C-AYGR204C-A 114 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YKL065W-AYKL065W-A 222 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 RUF22RUF22 515 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YDR034C-CYDR034C-C 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YFL002W-BYFL002W-B 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YGR161W-AYGR161W-A 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YLR410W-AYLR410W-A 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YBL100W-AYBL100W-A 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 YCL020WYCL020W 1317 nt-0.16□□□□□ -2.43
TY1B-DR3Q99231 NTF2YER009W 378 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 YGR164WYGR164W 336 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 YGR265WYGR265W 411 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 NEJ1YLR265C 1029 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 YOR105WYOR105W 327 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 RCN2YOR220W 798 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 ARP9YMR033W 1404 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 DPB11YJL090C 2295 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 BIG1YHR101C 1008 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 SCW11YGL028C 1629 nt-0.17□□□□□ -2.44
TY1B-DR3Q99231 SLD3YGL113W 2007 nt-0.18□□□□□ -2.44
TY1B-DR3Q99231 KAR3YPR141C 2190 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 NOT5YPR072W 1683 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 MRPL24YMR193W 777 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 YPR170CYPR170C 336 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 PET111YMR257C 2403 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 YIL134C-AYIL134C-A 204 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 RPL26AYLR344W 384 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 YBR221W-AYBR221W-A 105 nt-0.19□□□□□ -2.44
TY1B-DR3Q99231 RPL26BYGR034W 384 nt-0.2□□□□□ -2.44
TY1B-DR3Q99231 NOP9YJL010C 2001 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 SBH1YER087C-B 249 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 VMA21YGR105W 234 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 COX3Q0275 810 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 IST3YIR005W 447 nt-0.21□□□□□ -2.44
TY1B-DR3Q99231 snR84snR84 550 nt-0.22□□□□□ -2.44
TY1B-DR3Q99231 YBR051WYBR051W 351 nt-0.22□□□□□ -2.44
TY1B-DR3Q99231 OCA6YDR067C 675 nt-0.22□□□□□ -2.45
TY1B-DR3Q99231 AI4Q0065 1671 nt-0.22□□□□□ -2.45
TY1B-DR3Q99231 TFB5YDR079C-A 219 nt-0.23□□□□□ -2.45
TY1B-DR3Q99231 SPO11YHL022C 1197 nt-0.23□□□□□ -2.45
TY1B-DR3Q99231 PRP42YDR235W 1635 nt-0.23□□□□□ -2.45
TY1B-DR3Q99231 YHL009W-BYHL009W-B 5409 nt-0.24□□□□□ -2.45
TY1B-DR3Q99231 YDL009CYDL009C 324 nt-0.24□□□□□ -2.45
TY1B-DR3Q99231 YJL114WYJL114W 681 nt-0.24□□□□□ -2.45
TY1B-DR3Q99231 YKE2YLR200W 345 nt-0.24□□□□□ -2.45
TY1B-DR3Q99231 YNL162W-AYNL162W-A 219 nt-0.24□□□□□ -2.45
TY1B-DR3Q99231 SUT2YPR009W 807 nt-0.25□□□□□ -2.45
TY1B-DR3Q99231 MMS4YBR098W 2076 nt-0.26□□□□□ -2.45
TY1B-DR3Q99231 YKL136WYKL136W 399 nt-0.26□□□□□ -2.45
TY1B-DR3Q99231 GEP7YGL057C 864 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 53.1 ms