Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 TSPY15P-201ENST00000457163 923 ntBASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 RARRES2P10-201ENST00000564312 460 ntBASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 AC097493.4-201ENST00000641197 219 ntBASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC46A1Q96NT5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 PGM5P4-201ENST00000421970 445 ntBASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC46A1Q96NT5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 AL390719.1-204ENST00000412397 1219 ntBASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 PRKY-204ENST00000533551 1019 ntBASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 AC012306.2-201ENST00000609350 630 ntBASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC46A1Q96NT5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC46A1Q96NT5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC46A1Q96NT5 AL355075.4-201ENST00000554988 638 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms