Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 AC005332.8-201ENST00000622750 2735 ntBASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 AL355802.2-201ENST00000402069 882 ntBASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 KRT18P61-201ENST00000585825 1298 ntBASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 AC133637.1-201ENST00000624115 1537 ntBASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.64■□□□□ 0.57
COX4I2Q96KJ9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 AC120498.9-201ENST00000339021 3867 ntBASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COX4I2Q96KJ9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 AC006970.2-201ENST00000450065 779 ntBASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COX4I2Q96KJ9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 AC112907.3-201ENST00000577781 2400 ntBASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 OR2I1P-207ENST00000453522 948 ntBASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 AL109923.1-201ENST00000618799 583 ntBASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COX4I2Q96KJ9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 BID-214ENST00000617586 542 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms