Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 AC004911.1-201ENST00000416316 871 ntBASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 BX119927.1-201ENST00000636596 1552 ntBASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 AL391422.3-201ENST00000603791 2761 ntBASIC19.78■□□□□ 0.76
PDLIM5Q96HC4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 AC112907.3-201ENST00000577781 2400 ntBASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 AC010980.2-201ENST00000587099 1412 ntBASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM5Q96HC4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM5Q96HC4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 PTBP1P-201ENST00000554374 1601 ntBASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 AC133552.2-202ENST00000575694 574 ntBASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 AC005181.1-201ENST00000604782 1256 ntBASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 AC080038.1-201ENST00000611274 1154 ntBASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM5Q96HC4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 MIR935-201ENST00000401179 91 ntBASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
PDLIM5Q96HC4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms