Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 AC099778.1-201ENST00000568593 1911 ntBASIC18.62■□□□□ 0.57
CNOT9Q92600 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 RARRES2P4-201ENST00000514074 484 ntBASIC18.62■□□□□ 0.57
CNOT9Q92600 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.62■□□□□ 0.57
CNOT9Q92600 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 IKBKGP1-201ENST00000612193 1073 ntBASIC18.62■□□□□ 0.57
CNOT9Q92600 AL356652.1-201ENST00000615962 565 ntBASIC18.62■□□□□ 0.57
CNOT9Q92600 AC092437.1-201ENST00000624794 1048 ntBASIC18.62■□□□□ 0.57
CNOT9Q92600 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.62■□□□□ 0.57
CNOT9Q92600 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT9Q92600 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT9Q92600 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNOT9Q92600 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT9Q92600 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.61■□□□□ 0.57
CNOT9Q92600 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.61■□□□□ 0.57
CNOT9Q92600 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNOT9Q92600 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNOT9Q92600 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNOT9Q92600 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT9Q92600 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT9Q92600 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 AC004911.1-201ENST00000416316 871 ntBASIC18.6■□□□□ 0.57
CNOT9Q92600 AC007322.1-201ENST00000426983 750 ntBASIC18.6■□□□□ 0.57
CNOT9Q92600 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.6■□□□□ 0.57
CNOT9Q92600 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.6■□□□□ 0.57
CNOT9Q92600 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT9Q92600 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT9Q92600 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNOT9Q92600 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT9Q92600 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT9Q92600 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CNOT9Q92600 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT9Q92600 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT9Q92600 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
CNOT9Q92600 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNOT9Q92600 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 PGM5P4-201ENST00000421970 445 ntBASIC18.59■□□□□ 0.57
CNOT9Q92600 CYP2T1P-201ENST00000432607 1285 ntBASIC18.59■□□□□ 0.57
CNOT9Q92600 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT9Q92600 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT9Q92600 AC231657.2-201ENST00000624556 255 ntBASIC18.59■□□□□ 0.57
CNOT9Q92600 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT9Q92600 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms