Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.62■■□□□ 1.05
SHC3Q92529 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.62■■□□□ 1.05
SHC3Q92529 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
SHC3Q92529 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.62■■□□□ 1.05
SHC3Q92529 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.62■■□□□ 1.05
SHC3Q92529 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 TCF3P1-201ENST00000423021 1937 ntBASIC21.62■■□□□ 1.05
SHC3Q92529 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 PTBP1P-201ENST00000554374 1601 ntBASIC21.62■■□□□ 1.05
SHC3Q92529 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC3Q92529 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC3Q92529 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SHC3Q92529 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SHC3Q92529 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
SHC3Q92529 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC3Q92529 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC3Q92529 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC3Q92529 AC026185.1-201ENST00000445748 174 ntBASIC21.61■■□□□ 1.05
SHC3Q92529 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC3Q92529 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
SHC3Q92529 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC3Q92529 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.61■■□□□ 1.05
SHC3Q92529 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SHC3Q92529 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC3Q92529 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SHC3Q92529 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SHC3Q92529 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC3Q92529 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
SHC3Q92529 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.6■■□□□ 1.05
SHC3Q92529 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC3Q92529 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
SHC3Q92529 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC3Q92529 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.59■■□□□ 1.05
SHC3Q92529 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
SHC3Q92529 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 CROCCP5-201ENST00000436658 830 ntBASIC21.59■■□□□ 1.05
SHC3Q92529 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.59■■□□□ 1.05
SHC3Q92529 KRT17P1-201ENST00000399211 1546 ntBASIC21.59■■□□□ 1.05
SHC3Q92529 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SHC3Q92529 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SHC3Q92529 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC3Q92529 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.58■■□□□ 1.05
SHC3Q92529 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.58■■□□□ 1.05
SHC3Q92529 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.58■■□□□ 1.05
SHC3Q92529 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 BX119927.1-201ENST00000636596 1552 ntBASIC21.58■■□□□ 1.05
SHC3Q92529 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 MIR663A-201ENST00000385250 93 ntBASIC21.58■■□□□ 1.05
SHC3Q92529 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHC3Q92529 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.58■■□□□ 1.05
SHC3Q92529 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.58■■□□□ 1.05
SHC3Q92529 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SHC3Q92529 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.58■■□□□ 1.05
SHC3Q92529 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.58■■□□□ 1.05
SHC3Q92529 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SHC3Q92529 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHC3Q92529 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHC3Q92529 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SHC3Q92529 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 AL589743.5-201ENST00000616611 1050 ntBASIC21.57■■□□□ 1.04
SHC3Q92529 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.57■■□□□ 1.04
SHC3Q92529 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.57■■□□□ 1.04
SHC3Q92529 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.57■■□□□ 1.04
SHC3Q92529 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SHC3Q92529 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC3Q92529 PCDHAC2-203ENST00000615316 3011 ntBASIC21.57■■□□□ 1.04
SHC3Q92529 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms