Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 AL353807.1-201ENST00000427475 662 ntBASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 AL355355.2-201ENST00000442321 338 ntBASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 CD177P1-201ENST00000606252 935 ntBASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF4Q8WZA2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 AL121906.2-201ENST00000621597 723 ntBASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF4Q8WZA2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF4Q8WZA2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.85
RAPGEF4Q8WZA2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF4Q8WZA2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF4Q8WZA2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.64■■□□□ 1.85
RAPGEF4Q8WZA2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 AL353708.3-201ENST00000610272 989 ntBASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF4Q8WZA2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RAPGEF4Q8WZA2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF4Q8WZA2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 RCN1P1-201ENST00000400413 996 ntBASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 FAM197Y1-201ENST00000421178 764 ntBASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RAPGEF4Q8WZA2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms