Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NIFKP4-201ENST00000567275 1192 ntBASIC20.46■□□□□ 0.87
PTCD2Q8WV60 AC069236.1-201ENST00000604339 616 ntBASIC20.46■□□□□ 0.87
PTCD2Q8WV60 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCD2Q8WV60 AC010980.2-201ENST00000587099 1412 ntBASIC20.44■□□□□ 0.86
PTCD2Q8WV60 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 AC008694.1-202ENST00000636953 945 ntBASIC20.44■□□□□ 0.86
PTCD2Q8WV60 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 AC087633.2-202ENST00000565166 1439 ntBASIC20.44■□□□□ 0.86
PTCD2Q8WV60 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCD2Q8WV60 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 AL512625.2-201ENST00000417533 625 ntBASIC20.43■□□□□ 0.86
PTCD2Q8WV60 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCD2Q8WV60 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 AL355472.2-201ENST00000422958 438 ntBASIC20.42■□□□□ 0.86
PTCD2Q8WV60 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 AC069152.1-201ENST00000438030 544 ntBASIC20.42■□□□□ 0.86
PTCD2Q8WV60 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCD2Q8WV60 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 BX276092.2-201ENST00000417668 665 ntBASIC20.41■□□□□ 0.86
PTCD2Q8WV60 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms