Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP1Q8TDR0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAF3IP1Q8TDR0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 PCDHAC2-203ENST00000615316 3011 ntBASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 AL162377.1-201ENST00000618844 1793 ntBASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP1Q8TDR0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 AL162412.1-201ENST00000567129 965 ntBASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 AC011767.1-201ENST00000617410 1153 ntBASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP1Q8TDR0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAF3IP1Q8TDR0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAF3IP1Q8TDR0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TRAF3IP1Q8TDR0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAF3IP1Q8TDR0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.02■□□□□ 0.95
TRAF3IP1Q8TDR0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 AC006015.1-201ENST00000429970 570 ntBASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRAF3IP1Q8TDR0 SMG8-203ENST00000578922 2178 ntBASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms