Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.77■■□□□ 1.08
BEST2Q8NFU1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
BEST2Q8NFU1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BEST2Q8NFU1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
BEST2Q8NFU1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 CLDN5-201ENST00000403084 2357 ntBASIC21.76■■□□□ 1.07
BEST2Q8NFU1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 AC008403.3-201ENST00000598924 454 ntBASIC21.76■■□□□ 1.07
BEST2Q8NFU1 AC006058.3-201ENST00000606217 1069 ntBASIC21.76■■□□□ 1.07
BEST2Q8NFU1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST2Q8NFU1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 AC023632.3-201ENST00000521633 145 ntBASIC21.75■■□□□ 1.07
BEST2Q8NFU1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 AL137060.1-201ENST00000618151 2648 ntBASIC21.75■■□□□ 1.07
BEST2Q8NFU1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BEST2Q8NFU1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 AC098590.1-201ENST00000468126 897 ntBASIC21.74■■□□□ 1.07
BEST2Q8NFU1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
BEST2Q8NFU1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 AC006557.6-201ENST00000623071 864 ntBASIC21.73■■□□□ 1.07
BEST2Q8NFU1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST2Q8NFU1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms