Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 OR10C1-204ENST00000622521 1039 ntBASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 AL355472.2-201ENST00000422958 438 ntBASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 AC026185.1-201ENST00000445748 174 ntBASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 AC092666.2-201ENST00000613287 246 ntBASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC116Q8IYX3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 KRT18P68-201ENST00000392293 1000 ntBASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 AC093787.1-201ENST00000450396 207 ntBASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 DPP3P2-201ENST00000416030 1696 ntBASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC116Q8IYX3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 AC112907.3-201ENST00000577781 2400 ntBASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 AC010980.2-201ENST00000587099 1412 ntBASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 RAP2CP1-201ENST00000605103 478 ntBASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC116Q8IYX3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 AL512625.2-201ENST00000417533 625 ntBASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 CYP2T3P-201ENST00000601990 817 ntBASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 AL050303.2-201ENST00000619798 666 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms