Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 AC007375.3-201ENST00000600936 2314 ntBASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 AL390719.1-204ENST00000412397 1219 ntBASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 AL158047.1-201ENST00000445918 881 ntBASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 AC005829.2-201ENST00000571422 1056 ntBASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 AC066615.1-201ENST00000640911 628 ntBASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN4BQ8IWT1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 RPS2P52-201ENST00000469610 820 ntBASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.33■■□□□ 1.01
SCN4BQ8IWT1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCN4BQ8IWT1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCN4BQ8IWT1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SCN4BQ8IWT1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SCN4BQ8IWT1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SCN4BQ8IWT1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCN4BQ8IWT1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SCN4BQ8IWT1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.33■■□□□ 1
SCN4BQ8IWT1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 AC142381.4-202ENST00000563973 229 ntBASIC21.32■■□□□ 1
SCN4BQ8IWT1 AC233263.1-201ENST00000578059 224 ntBASIC21.32■■□□□ 1
SCN4BQ8IWT1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.32■■□□□ 1
SCN4BQ8IWT1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN4BQ8IWT1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SCN4BQ8IWT1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCN4BQ8IWT1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN4BQ8IWT1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN4BQ8IWT1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.31■■□□□ 1
SCN4BQ8IWT1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCN4BQ8IWT1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SCN4BQ8IWT1 POM121L13P-201ENST00000422362 380 ntBASIC21.3■■□□□ 1
SCN4BQ8IWT1 GCSHP5-201ENST00000443090 522 ntBASIC21.3■■□□□ 1
SCN4BQ8IWT1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SCN4BQ8IWT1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN4BQ8IWT1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms