Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 AL020996.1-203ENST00000536896 2307 ntBASIC18.92■□□□□ 0.62
CCDC71Q8IV32 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 FP700111.2-201ENST00000619190 1892 ntBASIC18.91■□□□□ 0.62
CCDC71Q8IV32 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC71Q8IV32 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 KRT18P20-201ENST00000548986 1279 ntBASIC18.9■□□□□ 0.62
CCDC71Q8IV32 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71Q8IV32 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CCDC71Q8IV32 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC71Q8IV32 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.62
CCDC71Q8IV32 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC71Q8IV32 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71Q8IV32 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 SMG8-203ENST00000578922 2178 ntBASIC18.88■□□□□ 0.61
CCDC71Q8IV32 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71Q8IV32 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms