Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 MIR2861-201ENST00000636310 90 ntBASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI1Q7Z5J4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI1Q7Z5J4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 AC005229.4-201ENST00000610085 2198 ntBASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 AC012306.2-201ENST00000609350 630 ntBASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI1Q7Z5J4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 AL135905.2-201ENST00000584934 1404 ntBASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI1Q7Z5J4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI1Q7Z5J4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI1Q7Z5J4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI1Q7Z5J4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI1Q7Z5J4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI1Q7Z5J4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms