Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF549Q6P9A3 MIR935-201ENST00000401179 91 ntBASIC20.08■□□□□ 0.81
ZNF549Q6P9A3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF549Q6P9A3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ZNF549Q6P9A3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.08■□□□□ 0.81
ZNF549Q6P9A3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF549Q6P9A3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 DPP3P2-201ENST00000416030 1696 ntBASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 AC004911.1-201ENST00000416316 871 ntBASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF549Q6P9A3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF549Q6P9A3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 AC231657.2-201ENST00000624556 255 ntBASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF549Q6P9A3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 AC007322.1-201ENST00000426983 750 ntBASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 AC100791.3-201ENST00000617619 330 ntBASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF549Q6P9A3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms