Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
KRT40Q6A162 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.43■■□□□ 1.34
KRT40Q6A162 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
KRT40Q6A162 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 SMG8-203ENST00000578922 2178 ntBASIC23.43■■□□□ 1.34
KRT40Q6A162 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
KRT40Q6A162 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.43■■□□□ 1.34
KRT40Q6A162 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT40Q6A162 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.43■■□□□ 1.34
KRT40Q6A162 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.43■■□□□ 1.34
KRT40Q6A162 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.43■■□□□ 1.34
KRT40Q6A162 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
KRT40Q6A162 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.43■■□□□ 1.34
KRT40Q6A162 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.42■■□□□ 1.34
KRT40Q6A162 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 SLC29A4P1-201ENST00000398760 971 ntBASIC23.42■■□□□ 1.34
KRT40Q6A162 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.42■■□□□ 1.34
KRT40Q6A162 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
KRT40Q6A162 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.42■■□□□ 1.34
KRT40Q6A162 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.42■■□□□ 1.34
KRT40Q6A162 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT40Q6A162 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT40Q6A162 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
KRT40Q6A162 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 SLC25A24-204ENST00000569674 2357 ntBASIC23.41■■□□□ 1.34
KRT40Q6A162 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.41■■□□□ 1.34
KRT40Q6A162 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.41■■□□□ 1.34
KRT40Q6A162 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.41■■□□□ 1.34
KRT40Q6A162 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.41■■□□□ 1.34
KRT40Q6A162 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
KRT40Q6A162 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.41■■□□□ 1.34
KRT40Q6A162 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KRT40Q6A162 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.4■■□□□ 1.34
KRT40Q6A162 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.4■■□□□ 1.34
KRT40Q6A162 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.4■■□□□ 1.34
KRT40Q6A162 AC099778.1-201ENST00000568593 1911 ntBASIC23.4■■□□□ 1.34
KRT40Q6A162 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
KRT40Q6A162 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.4■■□□□ 1.34
KRT40Q6A162 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.4■■□□□ 1.34
KRT40Q6A162 AC100791.3-201ENST00000617619 330 ntBASIC23.4■■□□□ 1.34
KRT40Q6A162 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KRT40Q6A162 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
KRT40Q6A162 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KRT40Q6A162 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KRT40Q6A162 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KRT40Q6A162 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
KRT40Q6A162 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KRT40Q6A162 MCRIP2P1-201ENST00000394346 511 ntBASIC23.39■■□□□ 1.33
KRT40Q6A162 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.39■■□□□ 1.33
KRT40Q6A162 PGM5P4-201ENST00000421970 445 ntBASIC23.39■■□□□ 1.33
KRT40Q6A162 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.39■■□□□ 1.33
KRT40Q6A162 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.39■■□□□ 1.33
KRT40Q6A162 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
KRT40Q6A162 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KRT40Q6A162 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.39■■□□□ 1.33
KRT40Q6A162 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KRT40Q6A162 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.39■■□□□ 1.33
KRT40Q6A162 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KRT40Q6A162 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KRT40Q6A162 AC112907.3-201ENST00000577781 2400 ntBASIC23.39■■□□□ 1.33
KRT40Q6A162 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.39■■□□□ 1.33
KRT40Q6A162 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
KRT40Q6A162 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KRT40Q6A162 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KRT40Q6A162 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KRT40Q6A162 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
KRT40Q6A162 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.38■■□□□ 1.33
KRT40Q6A162 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms