Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 AC244015.2-201ENST00000616358 1861 ntBASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 TMPOP1-202ENST00000424642 1267 ntBASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.89■■■□□ 2.54
CDC42BPAQ5VT25 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.89■■■□□ 2.53
CDC42BPAQ5VT25 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 LSR-203ENST00000360798 1963 ntTSL 2 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
CDC42BPAQ5VT25 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC30.87■■■□□ 2.53
CDC42BPAQ5VT25 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 NIFKP9-201ENST00000419265 221 ntBASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDC42BPAQ5VT25 AL390955.1-201ENST00000428694 934 ntBASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 AC145285.6-201ENST00000604632 637 ntBASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
CDC42BPAQ5VT25 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
CDC42BPAQ5VT25 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDC42BPAQ5VT25 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
CDC42BPAQ5VT25 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
CDC42BPAQ5VT25 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDC42BPAQ5VT25 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 KRT18P35-201ENST00000510488 1269 ntBASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 Z98882.1-201ENST00000622160 2253 ntBASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPAQ5VT25 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPAQ5VT25 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.82■■■□□ 2.52
CDC42BPAQ5VT25 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPAQ5VT25 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPAQ5VT25 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPAQ5VT25 DUT-205ENST00000558813 769 ntTSL 2 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms