Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.89■■□□□ 1.09
CBWD6Q4V339 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD6Q4V339 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD6Q4V339 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
CBWD6Q4V339 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CBWD6Q4V339 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 AC105036.2-201ENST00000569468 176 ntBASIC21.87■■□□□ 1.09
CBWD6Q4V339 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
CBWD6Q4V339 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.87■■□□□ 1.09
CBWD6Q4V339 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.87■■□□□ 1.09
CBWD6Q4V339 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD6Q4V339 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 AF201337.1-201ENST00000520239 748 ntBASIC21.86■■□□□ 1.09
CBWD6Q4V339 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.86■■□□□ 1.09
CBWD6Q4V339 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBWD6Q4V339 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CBWD6Q4V339 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CBWD6Q4V339 PTBP1P-201ENST00000554374 1601 ntBASIC21.84■■□□□ 1.09
CBWD6Q4V339 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CBWD6Q4V339 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CBWD6Q4V339 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD6Q4V339 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD6Q4V339 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms