Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 RPS2P4-201ENST00000476944 856 ntBASIC24.37■■□□□ 1.49
PDS5AQ29RF7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PDS5AQ29RF7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 AC239809.2-201ENST00000415381 517 ntBASIC24.36■■□□□ 1.49
PDS5AQ29RF7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PDS5AQ29RF7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 AL031963.3-201ENST00000606441 850 ntBASIC24.35■■□□□ 1.49
PDS5AQ29RF7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDS5AQ29RF7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 MIR718-201ENST00000390190 70 ntBASIC24.34■■□□□ 1.49
PDS5AQ29RF7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 AL023875.1-201ENST00000640777 796 ntBASIC24.34■■□□□ 1.49
PDS5AQ29RF7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.34■■□□□ 1.49
PDS5AQ29RF7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.33■■□□□ 1.49
PDS5AQ29RF7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDS5AQ29RF7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.33■■□□□ 1.49
PDS5AQ29RF7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDS5AQ29RF7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDS5AQ29RF7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PDS5AQ29RF7 HLA-G-202ENST00000376815 851 ntBASIC24.33■■□□□ 1.48
PDS5AQ29RF7 HLA-G-203ENST00000376818 1127 ntBASIC24.33■■□□□ 1.48
PDS5AQ29RF7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PDS5AQ29RF7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PDS5AQ29RF7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.33■■□□□ 1.48
PDS5AQ29RF7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms