Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 IRC8YJL051W 2469 nt2.05□□□□□ -2.08
PDH1Q12428 YGR174W-AYGR174W-A 87 nt2.05□□□□□ -2.08
PDH1Q12428 TIM13YGR181W 318 nt2.05□□□□□ -2.08
PDH1Q12428 YHL037CYHL037C 402 nt2.05□□□□□ -2.08
PDH1Q12428 YPR099CYPR099C 357 nt2.05□□□□□ -2.08
PDH1Q12428 VMA9YCL005W-A 222 nt2.05□□□□□ -2.08
PDH1Q12428 NHP2YDL208W 471 nt2.04□□□□□ -2.08
PDH1Q12428 YDR102CYDR102C 333 nt2.04□□□□□ -2.08
PDH1Q12428 YER172C-AYER172C-A 381 nt2.04□□□□□ -2.08
PDH1Q12428 MAM33YIL070C 801 nt2.04□□□□□ -2.08
PDH1Q12428 RIC1YLR039C 3171 nt2.04□□□□□ -2.08
PDH1Q12428 DIS3YOL021C 3006 nt2.04□□□□□ -2.08
PDH1Q12428 MGM1YOR211C 2646 nt2.04□□□□□ -2.08
PDH1Q12428 ARP7YPR034W 1434 nt2.04□□□□□ -2.08
PDH1Q12428 NAM7YMR080C 2916 nt2.04□□□□□ -2.08
PDH1Q12428 BRE1YDL074C 2103 nt2.03□□□□□ -2.08
PDH1Q12428 YDL152WYDL152W 366 nt2.03□□□□□ -2.08
PDH1Q12428 YMR193C-AYMR193C-A 387 nt2.03□□□□□ -2.08
PDH1Q12428 HCH1YNL281W 462 nt2.03□□□□□ -2.08
PDH1Q12428 YPL229WYPL229W 621 nt2.03□□□□□ -2.08
PDH1Q12428 MGA2YIR033W 3342 nt2.03□□□□□ -2.08
PDH1Q12428 PET309YLR067C 2898 nt2.02□□□□□ -2.09
PDH1Q12428 YDR413CYDR413C 576 nt2.02□□□□□ -2.09
PDH1Q12428 YER097WYER097W 330 nt2.02□□□□□ -2.09
PDH1Q12428 YGL069CYGL069C 465 nt2.02□□□□□ -2.09
PDH1Q12428 HSK3YKL138C-A 210 nt2.02□□□□□ -2.09
PDH1Q12428 RPS27AYKL156W 249 nt2.02□□□□□ -2.09
PDH1Q12428 MF(ALPHA)1YPL187W 498 nt2.02□□□□□ -2.09
PDH1Q12428 NOT5YPR072W 1683 nt2.02□□□□□ -2.09
PDH1Q12428 PAN3YKL025C 2040 nt2.01□□□□□ -2.09
PDH1Q12428 TOR2YKL203C 7425 nt2.01□□□□□ -2.09
PDH1Q12428 UFD4YKL010C 4452 nt2.01□□□□□ -2.09
PDH1Q12428 CFT2YLR115W 2580 nt2.01□□□□□ -2.09
PDH1Q12428 YCR087C-AYCR087C-A 462 nt2.01□□□□□ -2.09
PDH1Q12428 RPL32YBL092W 393 nt2.01□□□□□ -2.09
PDH1Q12428 CDC27YBL084C 2277 nt2.01□□□□□ -2.09
PDH1Q12428 YLR149CYLR149C 2193 nt2□□□□□ -2.09
PDH1Q12428 HCS1YKL017C 2052 nt2□□□□□ -2.09
PDH1Q12428 YFR016CYFR016C 3702 nt2□□□□□ -2.09
PDH1Q12428 TOF2YKR010C 2316 nt2□□□□□ -2.09
PDH1Q12428 YDL062WYDL062W 426 nt2□□□□□ -2.09
PDH1Q12428 PHS1YJL097W 654 nt2□□□□□ -2.09
PDH1Q12428 YML099W-AYML099W-A 330 nt2□□□□□ -2.09
PDH1Q12428 SNF5YBR289W 2718 nt2□□□□□ -2.09
PDH1Q12428 YBP1YBR216C 2025 nt2□□□□□ -2.09
PDH1Q12428 SMY1YKL079W 1971 nt1.99□□□□□ -2.09
PDH1Q12428 PEP1YBL017C 4740 nt1.99□□□□□ -2.09
PDH1Q12428 LYS9YNR050C 1341 nt1.99□□□□□ -2.09
PDH1Q12428 RPH1YER169W 2391 nt1.99□□□□□ -2.09
PDH1Q12428 STB4YMR019W 2850 nt1.99□□□□□ -2.09
PDH1Q12428 YER181CYER181C 324 nt1.99□□□□□ -2.09
PDH1Q12428 YIL115W-AYIL115W-A 372 nt1.99□□□□□ -2.09
PDH1Q12428 TMA7YLR262C-A 195 nt1.99□□□□□ -2.09
PDH1Q12428 YOR072W-AYOR072W-A 249 nt1.99□□□□□ -2.09
PDH1Q12428 YBR224WYBR224W 516 nt1.99□□□□□ -2.09
PDH1Q12428 FAB1YFR019W 6837 nt1.99□□□□□ -2.09
PDH1Q12428 PEP3YLR148W 2757 nt1.98□□□□□ -2.09
PDH1Q12428 RBK1YCR036W 1002 nt1.98□□□□□ -2.09
PDH1Q12428 RPA34YJL148W 702 nt1.98□□□□□ -2.09
PDH1Q12428 YMR031W-AYMR031W-A 327 nt1.98□□□□□ -2.09
PDH1Q12428 snR36snR36 182 nt1.98□□□□□ -2.09
PDH1Q12428 SCH9YHR205W 2475 nt1.98□□□□□ -2.09
PDH1Q12428 RKM1YPL208W 1752 nt1.98□□□□□ -2.09
PDH1Q12428 YBR184WYBR184W 1572 nt1.98□□□□□ -2.09
PDH1Q12428 MCD1YDL003W 1701 nt1.97□□□□□ -2.09
PDH1Q12428 YFL032WYFL032W 321 nt1.97□□□□□ -2.09
PDH1Q12428 SEF1YBL066C 3447 nt1.97□□□□□ -2.09
PDH1Q12428 MNL2YLR057W 2550 nt1.97□□□□□ -2.09
PDH1Q12428 SEC31YDL195W 3822 nt1.96□□□□□ -2.1
PDH1Q12428 CYB5YNL111C 363 nt1.96□□□□□ -2.1
PDH1Q12428 DGR1YNL130C-A 147 nt1.96□□□□□ -2.1
PDH1Q12428 VMR1YHL035C 4779 nt1.96□□□□□ -2.1
PDH1Q12428 DFG16YOR030W 1860 nt1.96□□□□□ -2.1
PDH1Q12428 SGO1YOR073W 1773 nt1.95□□□□□ -2.1
PDH1Q12428 PAC1YOR269W 1485 nt1.95□□□□□ -2.1
PDH1Q12428 YIL059CYIL059C 366 nt1.95□□□□□ -2.1
PDH1Q12428 RPL39YJL189W 156 nt1.95□□□□□ -2.1
PDH1Q12428 YOR231C-AYOR231C-A 201 nt1.95□□□□□ -2.1
PDH1Q12428 YOR394C-AYOR394C-A 168 nt1.95□□□□□ -2.1
PDH1Q12428 SET2YJL168C 2202 nt1.95□□□□□ -2.1
PDH1Q12428 CHC1YGL206C 4962 nt1.95□□□□□ -2.1
PDH1Q12428 ELG1YOR144C 2376 nt1.94□□□□□ -2.1
PDH1Q12428 IRC20YLR247C 4671 nt1.94□□□□□ -2.1
PDH1Q12428 HSH155YMR288W 2916 nt1.93□□□□□ -2.1
PDH1Q12428 YDR169C-AYDR169C-A 150 nt1.93□□□□□ -2.1
PDH1Q12428 YBL083CYBL083C 426 nt1.93□□□□□ -2.1
PDH1Q12428 PLC1YPL268W 2610 nt1.92□□□□□ -2.1
PDH1Q12428 snR65snR65 100 nt1.92□□□□□ -2.1
PDH1Q12428 RPL35AYDL191W 363 nt1.92□□□□□ -2.1
PDH1Q12428 YDR183C-AYDR183C-A 258 nt1.92□□□□□ -2.1
PDH1Q12428 YHR007C-AYHR007C-A 216 nt1.92□□□□□ -2.1
PDH1Q12428 YMR045CYMR045C 5268 nt1.92□□□□□ -2.1
PDH1Q12428 SPP41YDR464W 4308 nt1.92□□□□□ -2.1
PDH1Q12428 STE5YDR103W 2754 nt1.92□□□□□ -2.1
PDH1Q12428 MYO4YAL029C 4416 nt1.91□□□□□ -2.1
PDH1Q12428 TDA9YML081W 3756 nt1.91□□□□□ -2.1
PDH1Q12428 SLM1YIL105C 2061 nt1.91□□□□□ -2.1
PDH1Q12428 YDR008CYDR008C 351 nt1.91□□□□□ -2.1
PDH1Q12428 CSN9YDR179C 489 nt1.91□□□□□ -2.1
PDH1Q12428 HHT1YBR010W 411 nt1.91□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms