Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH1Q08174 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH1Q08174 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH1Q08174 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH1Q08174 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH1Q08174 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDH1Q08174 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH1Q08174 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH1Q08174 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PCDH1Q08174 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH1Q08174 KRT18P68-201ENST00000392293 1000 ntBASIC19.5■□□□□ 0.71
PCDH1Q08174 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDH1Q08174 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH1Q08174 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 CYP2T3P-201ENST00000601990 817 ntBASIC19.5■□□□□ 0.71
PCDH1Q08174 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH1Q08174 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH1Q08174 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH1Q08174 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH1Q08174 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PCDH1Q08174 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 AC133552.2-202ENST00000575694 574 ntBASIC19.49■□□□□ 0.71
PCDH1Q08174 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH1Q08174 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH1Q08174 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH1Q08174 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH1Q08174 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH1Q08174 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH1Q08174 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH1Q08174 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH1Q08174 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH1Q08174 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 AC004911.1-201ENST00000416316 871 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDH1Q08174 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDH1Q08174 RAP2CP1-201ENST00000605103 478 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 AC080038.1-201ENST00000611274 1154 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 AC092666.2-201ENST00000613287 246 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 AC105020.6-201ENST00000621523 1217 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 AC008694.1-202ENST00000636953 945 ntBASIC19.48■□□□□ 0.71
PCDH1Q08174 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH1Q08174 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH1Q08174 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDH1Q08174 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH1Q08174 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH1Q08174 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDH1Q08174 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH1Q08174 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDH1Q08174 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH1Q08174 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDH1Q08174 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH1Q08174 AC010980.2-201ENST00000587099 1412 ntBASIC19.47■□□□□ 0.71
PCDH1Q08174 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH1Q08174 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH1Q08174 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH1Q08174 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH1Q08174 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms