Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 NST1YNL091W 3723 nt1.11□□□□□ -2.23
SDO1Q07953 SPR3YGR059W 1539 nt1.1□□□□□ -2.23
SDO1Q07953 MDS3YGL197W 4464 nt1.1□□□□□ -2.23
SDO1Q07953 TRM732YMR259C 4263 nt1.1□□□□□ -2.23
SDO1Q07953 YLL020CYLL020C 306 nt1.1□□□□□ -2.23
SDO1Q07953 YNL319WYNL319W 441 nt1.1□□□□□ -2.23
SDO1Q07953 YOR161W-BYOR161W-B 261 nt1.1□□□□□ -2.23
SDO1Q07953 YPR177CYPR177C 372 nt1.1□□□□□ -2.23
SDO1Q07953 YSY6YBR162W-A 198 nt1.1□□□□□ -2.23
SDO1Q07953 ZIP1YDR285W 2628 nt1.1□□□□□ -2.23
SDO1Q07953 PHR1YOR386W 1698 nt1.1□□□□□ -2.23
SDO1Q07953 NUP188YML103C 4968 nt1.09□□□□□ -2.23
SDO1Q07953 SEC3YER008C 4011 nt1.09□□□□□ -2.23
SDO1Q07953 SWI5YDR146C 2130 nt1.09□□□□□ -2.23
SDO1Q07953 PAU2YEL049W 363 nt1.09□□□□□ -2.23
SDO1Q07953 YGR283CYGR283C 1026 nt1.09□□□□□ -2.23
SDO1Q07953 YHR028W-AYHR028W-A 321 nt1.09□□□□□ -2.23
SDO1Q07953 RPL9BYNL067W 576 nt1.09□□□□□ -2.23
SDO1Q07953 GAL7YBR018C 1101 nt1.09□□□□□ -2.23
SDO1Q07953 CDC31YOR257W 486 nt1.09□□□□□ -2.23
SDO1Q07953 YPR099CYPR099C 357 nt1.09□□□□□ -2.23
SDO1Q07953 PPN1YDR452W 2025 nt1.09□□□□□ -2.24
SDO1Q07953 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
SDO1Q07953 VPS54YDR027C 2670 nt1.08□□□□□ -2.24
SDO1Q07953 GMC2YLR445W 567 nt1.08□□□□□ -2.24
SDO1Q07953 YOR248WYOR248W 303 nt1.08□□□□□ -2.24
SDO1Q07953 YBR071WYBR071W 636 nt1.08□□□□□ -2.24
SDO1Q07953 YBR121C-AYBR121C-A 159 nt1.08□□□□□ -2.24
SDO1Q07953 KIP1YBL063W 3336 nt1.08□□□□□ -2.24
SDO1Q07953 PAN3YKL025C 2040 nt1.08□□□□□ -2.24
SDO1Q07953 GDS1YOR355W 1569 nt1.08□□□□□ -2.24
SDO1Q07953 YJR029WYJR029W 5268 nt1.06□□□□□ -2.24
SDO1Q07953 YPR137C-BYPR137C-B 5268 nt1.06□□□□□ -2.24
SDO1Q07953 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SDO1Q07953 RPL34BYIL052C 366 nt1.06□□□□□ -2.24
SDO1Q07953 RPL33BYOR234C 324 nt1.06□□□□□ -2.24
SDO1Q07953 YOP1YPR028W 543 nt1.05□□□□□ -2.24
SDO1Q07953 TOF2YKR010C 2316 nt1.04□□□□□ -2.24
SDO1Q07953 YDR003W-AYDR003W-A 123 nt1.04□□□□□ -2.24
SDO1Q07953 YDR509WYDR509W 348 nt1.04□□□□□ -2.24
SDO1Q07953 BER1YLR412W 825 nt1.04□□□□□ -2.24
SDO1Q07953 YBR032WYBR032W 303 nt1.04□□□□□ -2.24
SDO1Q07953 SWI4YER111C 3282 nt1.04□□□□□ -2.24
SDO1Q07953 MSH3YCR092C 3057 nt1.04□□□□□ -2.24
SDO1Q07953 RTR1YER139C 681 nt1.03□□□□□ -2.24
SDO1Q07953 YFL012WYFL012W 447 nt1.03□□□□□ -2.24
SDO1Q07953 PRM8YGL053W 714 nt1.03□□□□□ -2.24
SDO1Q07953 YKL044WYKL044W 321 nt1.03□□□□□ -2.24
SDO1Q07953 MEI5YPL121C 669 nt1.03□□□□□ -2.24
SDO1Q07953 SHE9YDR393W 1371 nt1.03□□□□□ -2.24
SDO1Q07953 NOC3YLR002C 1992 nt1.03□□□□□ -2.25
SDO1Q07953 SRP14YDL092W 441 nt1.02□□□□□ -2.25
SDO1Q07953 SPT21YMR179W 2277 nt1.02□□□□□ -2.25
SDO1Q07953 IRC16YPR038W 360 nt1.02□□□□□ -2.25
SDO1Q07953 PIP2YOR363C 2991 nt1.02□□□□□ -2.25
SDO1Q07953 SVS1YPL163C 783 nt1.01□□□□□ -2.25
SDO1Q07953 YPR039WYPR039W 336 nt1.01□□□□□ -2.25
SDO1Q07953 PIG1YLR273C 1947 nt1□□□□□ -2.25
SDO1Q07953 YDR008CYDR008C 351 nt1□□□□□ -2.25
SDO1Q07953 tR(UCU)Q1tR(UCU)Q1 73 nt1□□□□□ -2.25
SDO1Q07953 YKL068W-AYKL068W-A 237 nt1□□□□□ -2.25
SDO1Q07953 YCS4YLR272C 3531 nt1□□□□□ -2.25
SDO1Q07953 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
SDO1Q07953 MKT1YNL085W 2493 nt0.99□□□□□ -2.25
SDO1Q07953 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
SDO1Q07953 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
SDO1Q07953 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
SDO1Q07953 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
SDO1Q07953 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
SDO1Q07953 ILM1YJR118C 612 nt0.99□□□□□ -2.25
SDO1Q07953 snR14snR14 160 nt0.99□□□□□ -2.25
SDO1Q07953 NUT1YGL151W 3399 nt0.99□□□□□ -2.25
SDO1Q07953 CLU1YMR012W 3834 nt0.99□□□□□ -2.25
SDO1Q07953 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SDO1Q07953 NUP145YGL092W 3954 nt0.98□□□□□ -2.25
SDO1Q07953 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
SDO1Q07953 EAF1YDR359C 2949 nt0.98□□□□□ -2.25
SDO1Q07953 OCA6YDR067C 675 nt0.98□□□□□ -2.25
SDO1Q07953 YDR114CYDR114C 303 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)E1tH(GUG)E1 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)E2tH(GUG)E2 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)G1tH(GUG)G1 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)G2tH(GUG)G2 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)HtH(GUG)H 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)KtH(GUG)K 72 nt0.98□□□□□ -2.25
SDO1Q07953 tH(GUG)MtH(GUG)M 72 nt0.98□□□□□ -2.25
SDO1Q07953 YHL037CYHL037C 402 nt0.98□□□□□ -2.25
SDO1Q07953 YJR141WYJR141W 1044 nt0.98□□□□□ -2.25
SDO1Q07953 YMR153C-AYMR153C-A 336 nt0.98□□□□□ -2.25
SDO1Q07953 ROM2YLR371W 4071 nt0.97□□□□□ -2.25
SDO1Q07953 LYS14YDR034C 2373 nt0.97□□□□□ -2.25
SDO1Q07953 SPO23YBR250W 1572 nt0.97□□□□□ -2.25
SDO1Q07953 snR84snR84 550 nt0.97□□□□□ -2.25
SDO1Q07953 MPT5YGL178W 2580 nt0.97□□□□□ -2.25
SDO1Q07953 AIM44YPL158C 2277 nt0.96□□□□□ -2.26
SDO1Q07953 APL3YBL037W 3078 nt0.96□□□□□ -2.26
SDO1Q07953 TMA22YJR014W 597 nt0.96□□□□□ -2.26
SDO1Q07953 YBL029C-AYBL029C-A 285 nt0.96□□□□□ -2.26
SDO1Q07953 STB6YKL072W 2301 nt0.96□□□□□ -2.26
SDO1Q07953 GUP1YGL084C 1683 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms