Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.76■□□□□ 0.43
NKX6-1P78426 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.76■□□□□ 0.43
NKX6-1P78426 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.76■□□□□ 0.43
NKX6-1P78426 AL359736.2-201ENST00000621992 437 ntBASIC17.76■□□□□ 0.43
NKX6-1P78426 FAM197Y4-202ENST00000622692 608 ntBASIC17.76■□□□□ 0.43
NKX6-1P78426 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX6-1P78426 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.75■□□□□ 0.43
NKX6-1P78426 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NKX6-1P78426 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
NKX6-1P78426 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
NKX6-1P78426 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX6-1P78426 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX6-1P78426 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 AC073130.3-201ENST00000624389 2278 ntBASIC17.75■□□□□ 0.43
NKX6-1P78426 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NKX6-1P78426 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.75■□□□□ 0.43
NKX6-1P78426 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX6-1P78426 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-1P78426 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-1P78426 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX6-1P78426 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.74■□□□□ 0.43
NKX6-1P78426 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.74■□□□□ 0.43
NKX6-1P78426 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.74■□□□□ 0.43
NKX6-1P78426 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX6-1P78426 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX6-1P78426 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX6-1P78426 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NKX6-1P78426 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX6-1P78426 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NKX6-1P78426 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-1P78426 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NKX6-1P78426 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX6-1P78426 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.73■□□□□ 0.43
NKX6-1P78426 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NKX6-1P78426 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NKX6-1P78426 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX6-1P78426 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-1P78426 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NKX6-1P78426 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-1P78426 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NKX6-1P78426 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NKX6-1P78426 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms