Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 AL512625.2-201ENST00000417533 625 ntBASIC17.68■□□□□ 0.42
HIST1H3AP68431 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 IKBKGP1-201ENST00000612193 1073 ntBASIC17.68■□□□□ 0.42
HIST1H3AP68431 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HIST1H3AP68431 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H3AP68431 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 KRT18P68-201ENST00000392293 1000 ntBASIC17.67■□□□□ 0.42
HIST1H3AP68431 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 AC080038.1-201ENST00000611274 1154 ntBASIC17.67■□□□□ 0.42
HIST1H3AP68431 AC008694.1-202ENST00000636953 945 ntBASIC17.67■□□□□ 0.42
HIST1H3AP68431 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H3AP68431 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H3AP68431 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 CYP2T3P-201ENST00000601990 817 ntBASIC17.66■□□□□ 0.42
HIST1H3AP68431 AC105020.6-201ENST00000621523 1217 ntBASIC17.66■□□□□ 0.42
HIST1H3AP68431 AC073111.5-205ENST00000641717 521 ntBASIC17.66■□□□□ 0.42
HIST1H3AP68431 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H3AP68431 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H3AP68431 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 AC010980.2-201ENST00000587099 1412 ntBASIC17.65■□□□□ 0.42
HIST1H3AP68431 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 AC005181.1-201ENST00000604782 1256 ntBASIC17.65■□□□□ 0.42
HIST1H3AP68431 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H3AP68431 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms