Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 MYC-209ENST00000641252 345 ntBASIC19.2■□□□□ 0.66
SKP1P63208 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.2■□□□□ 0.66
SKP1P63208 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.19■□□□□ 0.66
SKP1P63208 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.19■□□□□ 0.66
SKP1P63208 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.19■□□□□ 0.66
SKP1P63208 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.19■□□□□ 0.66
SKP1P63208 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKP1P63208 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SKP1P63208 AL137060.1-201ENST00000618151 2648 ntBASIC19.19■□□□□ 0.66
SKP1P63208 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SKP1P63208 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.18■□□□□ 0.66
SKP1P63208 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.18■□□□□ 0.66
SKP1P63208 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 AC092720.2-201ENST00000602388 1665 ntBASIC19.18■□□□□ 0.66
SKP1P63208 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.18■□□□□ 0.66
SKP1P63208 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.18■□□□□ 0.66
SKP1P63208 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.18■□□□□ 0.66
SKP1P63208 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.18■□□□□ 0.66
SKP1P63208 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.18■□□□□ 0.66
SKP1P63208 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKP1P63208 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
SKP1P63208 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SKP1P63208 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.17■□□□□ 0.66
SKP1P63208 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.17■□□□□ 0.66
SKP1P63208 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.17■□□□□ 0.66
SKP1P63208 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.17■□□□□ 0.66
SKP1P63208 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.17■□□□□ 0.66
SKP1P63208 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.17■□□□□ 0.66
SKP1P63208 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKP1P63208 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
SKP1P63208 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.16■□□□□ 0.66
SKP1P63208 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.16■□□□□ 0.66
SKP1P63208 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKP1P63208 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SKP1P63208 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.16■□□□□ 0.66
SKP1P63208 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.16■□□□□ 0.66
SKP1P63208 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKP1P63208 HLA-B-256ENST00000639848 1089 ntBASIC19.16■□□□□ 0.66
SKP1P63208 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKP1P63208 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SKP1P63208 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.16■□□□□ 0.66
SKP1P63208 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.15■□□□□ 0.66
SKP1P63208 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
SKP1P63208 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SKP1P63208 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKP1P63208 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SKP1P63208 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SKP1P63208 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SKP1P63208 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.14■□□□□ 0.65
SKP1P63208 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms