Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL391422.3-201ENST00000603791 2761 ntBASIC17.77■□□□□ 0.44
LSM6P62312 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LSM6P62312 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
LSM6P62312 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.77■□□□□ 0.44
LSM6P62312 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM6P62312 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.77■□□□□ 0.43
LSM6P62312 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM6P62312 SMG8-203ENST00000578922 2178 ntBASIC17.77■□□□□ 0.43
LSM6P62312 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM6P62312 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSM6P62312 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM6P62312 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
LSM6P62312 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
LSM6P62312 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LSM6P62312 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.76■□□□□ 0.43
LSM6P62312 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
LSM6P62312 KRT18P68-201ENST00000392293 1000 ntBASIC17.76■□□□□ 0.43
LSM6P62312 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LSM6P62312 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.76■□□□□ 0.43
LSM6P62312 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM6P62312 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM6P62312 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LSM6P62312 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LSM6P62312 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
LSM6P62312 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 MIR935-201ENST00000401179 91 ntBASIC17.75■□□□□ 0.43
LSM6P62312 AL512625.2-201ENST00000417533 625 ntBASIC17.75■□□□□ 0.43
LSM6P62312 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSM6P62312 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM6P62312 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM6P62312 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM6P62312 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.75■□□□□ 0.43
LSM6P62312 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.75■□□□□ 0.43
LSM6P62312 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSM6P62312 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM6P62312 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM6P62312 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 CYP2T3P-201ENST00000601990 817 ntBASIC17.74■□□□□ 0.43
LSM6P62312 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM6P62312 AC105020.6-201ENST00000621523 1217 ntBASIC17.74■□□□□ 0.43
LSM6P62312 AC092437.1-201ENST00000624794 1048 ntBASIC17.74■□□□□ 0.43
LSM6P62312 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM6P62312 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM6P62312 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM6P62312 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM6P62312 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LSM6P62312 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.73■□□□□ 0.43
LSM6P62312 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.73■□□□□ 0.43
LSM6P62312 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.73■□□□□ 0.43
LSM6P62312 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.73■□□□□ 0.43
LSM6P62312 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
LSM6P62312 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.73■□□□□ 0.43
LSM6P62312 AC005181.1-201ENST00000604782 1256 ntBASIC17.73■□□□□ 0.43
LSM6P62312 AC080038.1-201ENST00000611274 1154 ntBASIC17.73■□□□□ 0.43
LSM6P62312 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.73■□□□□ 0.43
LSM6P62312 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms