Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM258P61165 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM258P61165 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM258P61165 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM258P61165 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM258P61165 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM258P61165 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM258P61165 MKRN4P-201ENST00000444706 1521 ntBASIC12.16□□□□□ -0.46
TMEM258P61165 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TMEM258P61165 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TMEM258P61165 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
TMEM258P61165 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TMEM258P61165 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM258P61165 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM258P61165 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TMEM258P61165 AC068418.2-201ENST00000577309 3703 ntBASIC12.15□□□□□ -0.46
TMEM258P61165 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TMEM258P61165 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM258P61165 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 AC135050.7-201ENST00000624508 2218 ntBASIC12.15□□□□□ -0.46
TMEM258P61165 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM258P61165 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TMEM258P61165 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TMEM258P61165 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TMEM258P61165 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TMEM258P61165 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM258P61165 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM258P61165 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TMEM258P61165 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
TMEM258P61165 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
TMEM258P61165 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TMEM258P61165 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.14□□□□□ -0.47
TMEM258P61165 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TMEM258P61165 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 AC084018.2-201ENST00000613093 2607 ntBASIC12.14□□□□□ -0.47
TMEM258P61165 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TMEM258P61165 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.14□□□□□ -0.47
TMEM258P61165 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM258P61165 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms