Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.01■■□□□ 1.75
EIF4A1P60842 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
EIF4A1P60842 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.01■■□□□ 1.75
EIF4A1P60842 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
EIF4A1P60842 AC124016.1-201ENST00000609552 612 ntBASIC26.01■■□□□ 1.75
EIF4A1P60842 AC005229.4-201ENST00000610085 2198 ntBASIC26.01■■□□□ 1.75
EIF4A1P60842 AL023875.1-201ENST00000640777 796 ntBASIC26.01■■□□□ 1.75
EIF4A1P60842 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EIF4A1P60842 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
EIF4A1P60842 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
EIF4A1P60842 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26■■□□□ 1.75
EIF4A1P60842 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26■■□□□ 1.75
EIF4A1P60842 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26■■□□□ 1.75
EIF4A1P60842 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26■■□□□ 1.75
EIF4A1P60842 AC133681.1-201ENST00000465482 601 ntBASIC26■■□□□ 1.75
EIF4A1P60842 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26■■□□□ 1.75
EIF4A1P60842 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26■■□□□ 1.75
EIF4A1P60842 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26■■□□□ 1.75
EIF4A1P60842 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26■■□□□ 1.75
EIF4A1P60842 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EIF4A1P60842 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
EIF4A1P60842 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
EIF4A1P60842 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
EIF4A1P60842 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.99■■□□□ 1.75
EIF4A1P60842 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.99■■□□□ 1.75
EIF4A1P60842 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
EIF4A1P60842 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.99■■□□□ 1.75
EIF4A1P60842 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.99■■□□□ 1.75
EIF4A1P60842 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
EIF4A1P60842 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.99■■□□□ 1.75
EIF4A1P60842 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.99■■□□□ 1.75
EIF4A1P60842 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EIF4A1P60842 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.98■■□□□ 1.75
EIF4A1P60842 FP700111.2-201ENST00000619190 1892 ntBASIC25.98■■□□□ 1.75
EIF4A1P60842 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EIF4A1P60842 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
EIF4A1P60842 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
EIF4A1P60842 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.98■■□□□ 1.75
EIF4A1P60842 Z99916.2-201ENST00000604037 246 ntBASIC25.98■■□□□ 1.75
EIF4A1P60842 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
EIF4A1P60842 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.98■■□□□ 1.75
EIF4A1P60842 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
EIF4A1P60842 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.97■■□□□ 1.75
EIF4A1P60842 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
EIF4A1P60842 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EIF4A1P60842 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
EIF4A1P60842 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.97■■□□□ 1.75
EIF4A1P60842 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.97■■□□□ 1.75
EIF4A1P60842 AC124283.5-201ENST00000624661 1809 ntBASIC25.97■■□□□ 1.75
EIF4A1P60842 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.97■■□□□ 1.75
EIF4A1P60842 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
EIF4A1P60842 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
EIF4A1P60842 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EIF4A1P60842 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.96■■□□□ 1.75
EIF4A1P60842 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EIF4A1P60842 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
EIF4A1P60842 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EIF4A1P60842 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.95■■□□□ 1.75
EIF4A1P60842 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
EIF4A1P60842 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
EIF4A1P60842 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
EIF4A1P60842 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.95■■□□□ 1.74
EIF4A1P60842 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.95■■□□□ 1.74
EIF4A1P60842 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.95■■□□□ 1.74
EIF4A1P60842 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
EIF4A1P60842 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
EIF4A1P60842 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.95■■□□□ 1.74
EIF4A1P60842 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.95■■□□□ 1.74
EIF4A1P60842 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
EIF4A1P60842 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
EIF4A1P60842 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EIF4A1P60842 AC007225.1-201ENST00000566331 1836 ntBASIC25.94■■□□□ 1.74
EIF4A1P60842 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
EIF4A1P60842 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.94■■□□□ 1.74
EIF4A1P60842 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.94■■□□□ 1.74
EIF4A1P60842 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.94■■□□□ 1.74
EIF4A1P60842 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
EIF4A1P60842 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
EIF4A1P60842 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
EIF4A1P60842 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
EIF4A1P60842 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.93■■□□□ 1.74
EIF4A1P60842 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms