Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH6P55285 AC004911.1-201ENST00000416316 871 ntBASIC21.04■□□□□ 0.96
CDH6P55285 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH6P55285 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH6P55285 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH6P55285 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH6P55285 DPP3P2-201ENST00000416030 1696 ntBASIC21.04■□□□□ 0.96
CDH6P55285 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH6P55285 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH6P55285 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDH6P55285 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CDH6P55285 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
CDH6P55285 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH6P55285 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH6P55285 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CDH6P55285 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH6P55285 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH6P55285 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH6P55285 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH6P55285 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH6P55285 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 AC069236.1-201ENST00000604339 616 ntBASIC21.03■□□□□ 0.96
CDH6P55285 AC080038.1-201ENST00000611274 1154 ntBASIC21.03■□□□□ 0.96
CDH6P55285 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CDH6P55285 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH6P55285 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH6P55285 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH6P55285 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH6P55285 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH6P55285 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH6P55285 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH6P55285 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH6P55285 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH6P55285 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH6P55285 MCRIP2P1-201ENST00000394346 511 ntBASIC21.02■□□□□ 0.96
CDH6P55285 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH6P55285 AC100791.3-201ENST00000617619 330 ntBASIC21.02■□□□□ 0.96
CDH6P55285 AC008694.1-202ENST00000636953 945 ntBASIC21.02■□□□□ 0.96
CDH6P55285 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CDH6P55285 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDH6P55285 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH6P55285 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDH6P55285 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.02■□□□□ 0.95
CDH6P55285 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDH6P55285 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.01■□□□□ 0.95
CDH6P55285 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDH6P55285 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDH6P55285 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH6P55285 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21■□□□□ 0.95
CDH6P55285 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21■□□□□ 0.95
CDH6P55285 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CDH6P55285 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH6P55285 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21■□□□□ 0.95
CDH6P55285 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21■□□□□ 0.95
CDH6P55285 AC092666.2-201ENST00000613287 246 ntBASIC21■□□□□ 0.95
CDH6P55285 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21■□□□□ 0.95
CDH6P55285 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH6P55285 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms