Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 ECL1YGR146C 636 nt1.42□□□□□ -2.18
YNL040WP53960 YKL183C-AYKL183C-A 213 nt1.42□□□□□ -2.18
YNL040WP53960 FCF2YLR051C 654 nt1.42□□□□□ -2.18
YNL040WP53960 RPS18BYML026C 441 nt1.42□□□□□ -2.18
YNL040WP53960 snR54snR54 86 nt1.42□□□□□ -2.18
YNL040WP53960 AHC1YOR023C 1701 nt1.42□□□□□ -2.18
YNL040WP53960 DCP2YNL118C 2913 nt1.41□□□□□ -2.18
YNL040WP53960 QCR7YDR529C 384 nt1.41□□□□□ -2.18
YNL040WP53960 YER088C-AYER088C-A 324 nt1.41□□□□□ -2.18
YNL040WP53960 YER135CYER135C 393 nt1.41□□□□□ -2.18
YNL040WP53960 YHR125WYHR125W 306 nt1.41□□□□□ -2.18
YNL040WP53960 TRX1YLR043C 312 nt1.41□□□□□ -2.18
YNL040WP53960 VPS20YMR077C 666 nt1.41□□□□□ -2.18
YNL040WP53960 FMP23YBR047W 528 nt1.41□□□□□ -2.18
YNL040WP53960 HIR3YJR140C 4947 nt1.41□□□□□ -2.18
YNL040WP53960 CGI121YML036W 546 nt1.4□□□□□ -2.19
YNL040WP53960 SKI3YPR189W 4299 nt1.4□□□□□ -2.19
YNL040WP53960 MON2YNL297C 4911 nt1.39□□□□□ -2.19
YNL040WP53960 RPL31AYDL075W 342 nt1.39□□□□□ -2.19
YNL040WP53960 SPO24YPR036W-A 204 nt1.39□□□□□ -2.19
YNL040WP53960 HMI1YOL095C 2121 nt1.39□□□□□ -2.19
YNL040WP53960 YLR419WYLR419W 4308 nt1.39□□□□□ -2.19
YNL040WP53960 CDC25YLR310C 4770 nt1.38□□□□□ -2.19
YNL040WP53960 SSK2YNR031C 4740 nt1.38□□□□□ -2.19
YNL040WP53960 YER023C-AYER023C-A 213 nt1.38□□□□□ -2.19
YNL040WP53960 CRG1YHR209W 876 nt1.38□□□□□ -2.19
YNL040WP53960 TMA22YJR014W 597 nt1.38□□□□□ -2.19
YNL040WP53960 NFU1YKL040C 771 nt1.38□□□□□ -2.19
YNL040WP53960 YOR032W-AYOR032W-A 201 nt1.38□□□□□ -2.19
YNL040WP53960 MDM20YOL076W 2391 nt1.37□□□□□ -2.19
YNL040WP53960 SEF1YBL066C 3447 nt1.37□□□□□ -2.19
YNL040WP53960 MAD1YGL086W 2250 nt1.37□□□□□ -2.19
YNL040WP53960 MSH3YCR092C 3057 nt1.37□□□□□ -2.19
YNL040WP53960 RPL42BYHR141C 321 nt1.37□□□□□ -2.19
YNL040WP53960 MCM22YJR135C 720 nt1.37□□□□□ -2.19
YNL040WP53960 YLR101CYLR101C 396 nt1.37□□□□□ -2.19
YNL040WP53960 YMR153C-AYMR153C-A 336 nt1.37□□□□□ -2.19
YNL040WP53960 YMR230W-AYMR230W-A 189 nt1.37□□□□□ -2.19
YNL040WP53960 RPL42AYNL162W 321 nt1.37□□□□□ -2.19
YNL040WP53960 YBR032WYBR032W 303 nt1.37□□□□□ -2.19
YNL040WP53960 YPR099CYPR099C 357 nt1.37□□□□□ -2.19
YNL040WP53960 SXM1YDR395W 2835 nt1.37□□□□□ -2.19
YNL040WP53960 RLM1YPL089C 2031 nt1.37□□□□□ -2.19
YNL040WP53960 ADR1YDR216W 3972 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
YNL040WP53960 YER006C-AYER006C-A 318 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
YNL040WP53960 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
YNL040WP53960 URM1YIL008W 300 nt1.36□□□□□ -2.19
YNL040WP53960 TBS1YBR150C 3285 nt1.36□□□□□ -2.19
YNL040WP53960 MSC6YOR354C 2079 nt1.36□□□□□ -2.19
YNL040WP53960 MAK10YEL053C 2202 nt1.35□□□□□ -2.19
YNL040WP53960 YDL152WYDL152W 366 nt1.35□□□□□ -2.19
YNL040WP53960 YJL007CYJL007C 315 nt1.35□□□□□ -2.19
YNL040WP53960 YJR157WYJR157W 363 nt1.35□□□□□ -2.19
YNL040WP53960 YBL073WYBL073W 312 nt1.35□□□□□ -2.19
YNL040WP53960 ZEO1YOL109W 342 nt1.35□□□□□ -2.19
YNL040WP53960 YOR192C-CYOR192C-C 237 nt1.35□□□□□ -2.19
YNL040WP53960 YPL205CYPL205C 345 nt1.35□□□□□ -2.19
YNL040WP53960 SPC98YNL126W 2541 nt1.35□□□□□ -2.19
YNL040WP53960 PAN3YKL025C 2040 nt1.35□□□□□ -2.19
YNL040WP53960 PBY1YBR094W 2262 nt1.33□□□□□ -2.2
YNL040WP53960 YER076W-AYER076W-A 348 nt1.33□□□□□ -2.2
YNL040WP53960 KCS1YDR017C 3153 nt1.33□□□□□ -2.2
YNL040WP53960 YML009C-AYML009C-A 327 nt1.32□□□□□ -2.2
YNL040WP53960 YCL046WYCL046W 324 nt1.32□□□□□ -2.2
YNL040WP53960 LAA1YJL207C 6045 nt1.32□□□□□ -2.2
YNL040WP53960 BST1YFL025C 3090 nt1.31□□□□□ -2.2
YNL040WP53960 YER087C-AYER087C-A 552 nt1.31□□□□□ -2.2
YNL040WP53960 YNL114CYNL114C 372 nt1.31□□□□□ -2.2
YNL040WP53960 YOL159CYOL159C 516 nt1.31□□□□□ -2.2
YNL040WP53960 ERP4YOR016C 624 nt1.31□□□□□ -2.2
YNL040WP53960 YGR130CYGR130C 2451 nt1.31□□□□□ -2.2
YNL040WP53960 MKT1YNL085W 2493 nt1.3□□□□□ -2.2
YNL040WP53960 GDS1YOR355W 1569 nt1.3□□□□□ -2.2
YNL040WP53960 HUG1YML058W-A 207 nt1.3□□□□□ -2.2
YNL040WP53960 RUF22RUF22 515 nt1.3□□□□□ -2.2
YNL040WP53960 OSH6YKR003W 1347 nt1.3□□□□□ -2.2
YNL040WP53960 TOF2YKR010C 2316 nt1.29□□□□□ -2.2
YNL040WP53960 YDR509WYDR509W 348 nt1.29□□□□□ -2.2
YNL040WP53960 YGR265WYGR265W 411 nt1.29□□□□□ -2.2
YNL040WP53960 RTT102YGR275W 474 nt1.29□□□□□ -2.2
YNL040WP53960 YHR028W-AYHR028W-A 321 nt1.29□□□□□ -2.2
YNL040WP53960 PAU18YLL064C 363 nt1.29□□□□□ -2.2
YNL040WP53960 YLR406C-AYLR406C-A 150 nt1.29□□□□□ -2.2
YNL040WP53960 YBL071CYBL071C 309 nt1.29□□□□□ -2.2
YNL040WP53960 PAU6YNR076W 363 nt1.29□□□□□ -2.2
YNL040WP53960 CBS1YDL069C 690 nt1.28□□□□□ -2.2
YNL040WP53960 YGL239CYGL239C 315 nt1.28□□□□□ -2.2
YNL040WP53960 ABM1YJR108W 372 nt1.28□□□□□ -2.2
YNL040WP53960 YLR287CYLR287C 1068 nt1.28□□□□□ -2.2
YNL040WP53960 NCA2YPR155C 1851 nt1.28□□□□□ -2.2
YNL040WP53960 SEC5YDR166C 2916 nt1.27□□□□□ -2.21
YNL040WP53960 CDC36YDL165W 576 nt1.27□□□□□ -2.21
YNL040WP53960 UBC7YMR022W 498 nt1.27□□□□□ -2.21
YNL040WP53960 RPL32YBL092W 393 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms