Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 PXA2YKL188C 2562 nt2.27□□□□□ -2.05
SLD3P53135 YEF3YLR249W 3135 nt2.27□□□□□ -2.05
SLD3P53135 NOP53YPL146C 1368 nt2.27□□□□□ -2.05
SLD3P53135 RPL35AYDL191W 363 nt2.27□□□□□ -2.05
SLD3P53135 RPL37BYDR500C 267 nt2.27□□□□□ -2.05
SLD3P53135 BRP1YGL007W 378 nt2.27□□□□□ -2.05
SLD3P53135 YMR193C-AYMR193C-A 387 nt2.27□□□□□ -2.05
SLD3P53135 RPH1YER169W 2391 nt2.27□□□□□ -2.05
SLD3P53135 YCR102W-AYCR102W-A 198 nt2.26□□□□□ -2.05
SLD3P53135 YDR183C-AYDR183C-A 258 nt2.26□□□□□ -2.05
SLD3P53135 YFL032WYFL032W 321 nt2.26□□□□□ -2.05
SLD3P53135 snR36snR36 182 nt2.26□□□□□ -2.05
SLD3P53135 UBP1YDL122W 2430 nt2.26□□□□□ -2.05
SLD3P53135 EFR3YMR212C 2349 nt2.25□□□□□ -2.05
SLD3P53135 YDR169C-AYDR169C-A 150 nt2.25□□□□□ -2.05
SLD3P53135 YIL156W-BYIL156W-B 222 nt2.25□□□□□ -2.05
SLD3P53135 RPL38YLR325C 237 nt2.25□□□□□ -2.05
SLD3P53135 SAR1YPL218W 573 nt2.25□□□□□ -2.05
SLD3P53135 NUT2YPR168W 474 nt2.25□□□□□ -2.05
SLD3P53135 NAM7YMR080C 2916 nt2.24□□□□□ -2.05
SLD3P53135 PHO91YNR013C 2685 nt2.24□□□□□ -2.05
SLD3P53135 HDA3YPR179C 1968 nt2.24□□□□□ -2.05
SLD3P53135 PAU18YLL064C 363 nt2.24□□□□□ -2.05
SLD3P53135 TAR1YLR154W-C 375 nt2.24□□□□□ -2.05
SLD3P53135 PAU6YNR076W 363 nt2.24□□□□□ -2.05
SLD3P53135 ARP7YPR034W 1434 nt2.24□□□□□ -2.05
SLD3P53135 SSQ1YLR369W 1974 nt2.23□□□□□ -2.05
SLD3P53135 IRC8YJL051W 2469 nt2.23□□□□□ -2.05
SLD3P53135 YHR032W-AYHR032W-A 180 nt2.23□□□□□ -2.05
SLD3P53135 RPL39YJL189W 156 nt2.23□□□□□ -2.05
SLD3P53135 MCM22YJR135C 720 nt2.23□□□□□ -2.05
SLD3P53135 YKL165C-AYKL165C-A 234 nt2.23□□□□□ -2.05
SLD3P53135 TMA10YLR327C 261 nt2.23□□□□□ -2.05
SLD3P53135 SCD5YOR329C 2619 nt2.23□□□□□ -2.05
SLD3P53135 DNF1YER166W 4716 nt2.23□□□□□ -2.05
SLD3P53135 TOF1YNL273W 3717 nt2.23□□□□□ -2.05
SLD3P53135 CHC1YGL206C 4962 nt2.23□□□□□ -2.05
SLD3P53135 BNI1YNL271C 5862 nt2.22□□□□□ -2.05
SLD3P53135 YCR087C-AYCR087C-A 462 nt2.22□□□□□ -2.05
SLD3P53135 SWI5YDR146C 2130 nt2.22□□□□□ -2.05
SLD3P53135 UPS1YLR193C 528 nt2.22□□□□□ -2.05
SLD3P53135 YMR031W-AYMR031W-A 327 nt2.22□□□□□ -2.05
SLD3P53135 SSD1YDR293C 3753 nt2.22□□□□□ -2.05
SLD3P53135 SWI6YLR182W 2412 nt2.22□□□□□ -2.05
SLD3P53135 NEW1YPL226W 3591 nt2.22□□□□□ -2.05
SLD3P53135 RIM20YOR275C 1986 nt2.21□□□□□ -2.05
SLD3P53135 YCL046WYCL046W 324 nt2.21□□□□□ -2.06
SLD3P53135 MSB1YOR188W 3414 nt2.21□□□□□ -2.06
SLD3P53135 FKS3YMR306W 5358 nt2.21□□□□□ -2.06
SLD3P53135 TFC8YPL007C 1767 nt2.21□□□□□ -2.06
SLD3P53135 BUD2YKL092C 3315 nt2.2□□□□□ -2.06
SLD3P53135 STE5YDR103W 2754 nt2.2□□□□□ -2.06
SLD3P53135 IRA2YOL081W 9240 nt2.2□□□□□ -2.06
SLD3P53135 CYC7YEL039C 342 nt2.2□□□□□ -2.06
SLD3P53135 YER088C-AYER088C-A 324 nt2.2□□□□□ -2.06
SLD3P53135 YAL059C-AYAL059C-A 423 nt2.2□□□□□ -2.06
SLD3P53135 HTB2YBL002W 396 nt2.2□□□□□ -2.06
SLD3P53135 PET309YLR067C 2898 nt2.2□□□□□ -2.06
SLD3P53135 YFL063WYFL063W 456 nt2.19□□□□□ -2.06
SLD3P53135 YHR180W-AYHR180W-A 183 nt2.19□□□□□ -2.06
SLD3P53135 YMR141W-AYMR141W-A 225 nt2.19□□□□□ -2.06
SLD3P53135 snR43snR43 209 nt2.19□□□□□ -2.06
SLD3P53135 ZRG17YNR039C 1818 nt2.19□□□□□ -2.06
SLD3P53135 UBP15YMR304W 3693 nt2.19□□□□□ -2.06
SLD3P53135 LYS14YDR034C 2373 nt2.18□□□□□ -2.06
SLD3P53135 PDR11YIL013C 4236 nt2.18□□□□□ -2.06
SLD3P53135 CAT2YML042W 2013 nt2.18□□□□□ -2.06
SLD3P53135 STH1YIL126W 4080 nt2.18□□□□□ -2.06
SLD3P53135 SAP185YJL098W 3177 nt2.18□□□□□ -2.06
SLD3P53135 YER181CYER181C 324 nt2.18□□□□□ -2.06
SLD3P53135 EMP24YGL200C 612 nt2.18□□□□□ -2.06
SLD3P53135 YOR231C-AYOR231C-A 201 nt2.18□□□□□ -2.06
SLD3P53135 FMP23YBR047W 528 nt2.18□□□□□ -2.06
SLD3P53135 YOP1YPR028W 543 nt2.18□□□□□ -2.06
SLD3P53135 NAB6YML117W 3405 nt2.18□□□□□ -2.06
SLD3P53135 RFX1YLR176C 2436 nt2.17□□□□□ -2.06
SLD3P53135 snR65snR65 100 nt2.17□□□□□ -2.06
SLD3P53135 GCN4YEL009C 846 nt2.17□□□□□ -2.06
SLD3P53135 YGR265WYGR265W 411 nt2.17□□□□□ -2.06
SLD3P53135 YIL115W-AYIL115W-A 372 nt2.17□□□□□ -2.06
SLD3P53135 YML007C-AYML007C-A 111 nt2.17□□□□□ -2.06
SLD3P53135 PDR3YBL005W 2931 nt2.17□□□□□ -2.06
SLD3P53135 MUK1YPL070W 1839 nt2.17□□□□□ -2.06
SLD3P53135 YPP1YGR198W 2454 nt2.16□□□□□ -2.06
SLD3P53135 snR70snR70 164 nt2.16□□□□□ -2.06
SLD3P53135 SCP160YJL080C 3669 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)G1tW(CCA)G1 72 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)G2tW(CCA)G2 72 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)JtW(CCA)J 72 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)KtW(CCA)K 72 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)MtW(CCA)M 72 nt2.15□□□□□ -2.07
SLD3P53135 tW(CCA)PtW(CCA)P 72 nt2.15□□□□□ -2.07
SLD3P53135 YML099W-AYML099W-A 330 nt2.15□□□□□ -2.07
SLD3P53135 SEC16YPL085W 6588 nt2.15□□□□□ -2.07
SLD3P53135 TFC3YAL001C 3483 nt2.15□□□□□ -2.07
SLD3P53135 MSC6YOR354C 2079 nt2.14□□□□□ -2.07
SLD3P53135 YOR343W-BYOR343W-B 5313 nt2.14□□□□□ -2.07
SLD3P53135 TDA9YML081W 3756 nt2.14□□□□□ -2.07
SLD3P53135 MVP1YMR004W 1536 nt2.14□□□□□ -2.07
SLD3P53135 YHR073W-AYHR073W-A 177 nt2.14□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 80.1 ms