Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 NUT1YGL151W 3399 nt0.29□□□□□ -2.36
VPS55P47111 YGL109WYGL109W 324 nt0.29□□□□□ -2.36
VPS55P47111 YDR034C-CYDR034C-C 1317 nt0.29□□□□□ -2.36
VPS55P47111 YFL002W-BYFL002W-B 1317 nt0.29□□□□□ -2.36
VPS55P47111 YGR161W-AYGR161W-A 1317 nt0.29□□□□□ -2.36
VPS55P47111 YLR410W-AYLR410W-A 1317 nt0.29□□□□□ -2.36
VPS55P47111 YBL100W-AYBL100W-A 1317 nt0.29□□□□□ -2.36
VPS55P47111 YOR192C-AYOR192C-A 1317 nt0.29□□□□□ -2.36
VPS55P47111 YCL020WYCL020W 1317 nt0.29□□□□□ -2.36
VPS55P47111 YGR045CYGR045C 363 nt0.28□□□□□ -2.36
VPS55P47111 RPL42BYHR141C 321 nt0.28□□□□□ -2.36
VPS55P47111 SPC24YMR117C 642 nt0.28□□□□□ -2.36
VPS55P47111 RPL42AYNL162W 321 nt0.28□□□□□ -2.36
VPS55P47111 IES4YOR189W 351 nt0.28□□□□□ -2.36
VPS55P47111 YBR200W-AYBR200W-A 165 nt0.28□□□□□ -2.36
VPS55P47111 PIG1YLR273C 1947 nt0.28□□□□□ -2.36
VPS55P47111 YLL007CYLL007C 1998 nt0.28□□□□□ -2.36
VPS55P47111 SLD3YGL113W 2007 nt0.27□□□□□ -2.37
VPS55P47111 SRP14YDL092W 441 nt0.27□□□□□ -2.37
VPS55P47111 LSO2YGR169C-A 279 nt0.27□□□□□ -2.37
VPS55P47111 YHL002C-AYHL002C-A 489 nt0.27□□□□□ -2.37
VPS55P47111 UBC7YMR022W 498 nt0.27□□□□□ -2.37
VPS55P47111 SGD1YLR336C 2700 nt0.27□□□□□ -2.37
VPS55P47111 YGL042CYGL042C 306 nt0.26□□□□□ -2.37
VPS55P47111 EDC1YGL222C 528 nt0.26□□□□□ -2.37
VPS55P47111 IMP3YHR148W 552 nt0.26□□□□□ -2.37
VPS55P47111 ISF1YMR081C 1017 nt0.26□□□□□ -2.37
VPS55P47111 YSP1YHR155W 3687 nt0.25□□□□□ -2.37
VPS55P47111 YBR184WYBR184W 1572 nt0.25□□□□□ -2.37
VPS55P47111 NBP1YLR457C 960 nt0.25□□□□□ -2.37
VPS55P47111 ABF2YMR072W 552 nt0.25□□□□□ -2.37
VPS55P47111 UFE1YOR075W 1041 nt0.25□□□□□ -2.37
VPS55P47111 YOR199WYOR199W 330 nt0.25□□□□□ -2.37
VPS55P47111 ALG13YGL047W 609 nt0.24□□□□□ -2.37
VPS55P47111 THG1YGR024C 714 nt0.24□□□□□ -2.37
VPS55P47111 IRC13YOR235W 315 nt0.24□□□□□ -2.37
VPS55P47111 NUT2YPR168W 474 nt0.24□□□□□ -2.37
VPS55P47111 SLM6YBR266C 453 nt0.24□□□□□ -2.37
VPS55P47111 NOC3YLR002C 1992 nt0.24□□□□□ -2.37
VPS55P47111 PXA2YKL188C 2562 nt0.24□□□□□ -2.37
VPS55P47111 STO1YMR125W 2586 nt0.24□□□□□ -2.37
VPS55P47111 PAN2YGL094C 3348 nt0.23□□□□□ -2.37
VPS55P47111 OCA6YDR067C 675 nt0.23□□□□□ -2.37
VPS55P47111 YGL204CYGL204C 306 nt0.23□□□□□ -2.37
VPS55P47111 YLR163W-AYLR163W-A 114 nt0.23□□□□□ -2.37
VPS55P47111 RPS7BYNL096C 573 nt0.23□□□□□ -2.37
VPS55P47111 AIM44YPL158C 2277 nt0.23□□□□□ -2.37
VPS55P47111 KAR3YPR141C 2190 nt0.23□□□□□ -2.37
VPS55P47111 IQG1YPL242C 4488 nt0.23□□□□□ -2.37
VPS55P47111 YHR063W-AYHR063W-A 336 nt0.22□□□□□ -2.37
VPS55P47111 RUF22RUF22 515 nt0.22□□□□□ -2.37
VPS55P47111 REF2YDR195W 1602 nt0.22□□□□□ -2.37
VPS55P47111 NTF2YER009W 378 nt0.21□□□□□ -2.38
VPS55P47111 RPL29YFR032C-A 180 nt0.21□□□□□ -2.38
VPS55P47111 NUP82YJL061W 2142 nt0.21□□□□□ -2.38
VPS55P47111 SAG1YJR004C 1953 nt0.21□□□□□ -2.38
VPS55P47111 ESP1YGR098C 4893 nt0.2□□□□□ -2.38
VPS55P47111 YDR509WYDR509W 348 nt0.2□□□□□ -2.38
VPS55P47111 RSM18YER050C 417 nt0.2□□□□□ -2.38
VPS55P47111 SDH2YLL041C 801 nt0.2□□□□□ -2.38
VPS55P47111 GMC2YLR445W 567 nt0.2□□□□□ -2.38
VPS55P47111 YMR321CYMR321C 318 nt0.2□□□□□ -2.38
VPS55P47111 YOR020W-AYOR020W-A 273 nt0.2□□□□□ -2.38
VPS55P47111 DBP6YNR038W 1890 nt0.2□□□□□ -2.38
VPS55P47111 YDR003W-AYDR003W-A 123 nt0.19□□□□□ -2.38
VPS55P47111 VPS74YDR372C 1038 nt0.19□□□□□ -2.38
VPS55P47111 IES5YER092W 378 nt0.19□□□□□ -2.38
VPS55P47111 YGR290WYGR290W 444 nt0.19□□□□□ -2.38
VPS55P47111 BFR2YDR299W 1605 nt0.19□□□□□ -2.38
VPS55P47111 HDA3YPR179C 1968 nt0.19□□□□□ -2.38
VPS55P47111 BIR1YJR089W 2865 nt0.19□□□□□ -2.38
VPS55P47111 SLI15YBR156C 2097 nt0.18□□□□□ -2.38
VPS55P47111 MKT1YNL085W 2493 nt0.18□□□□□ -2.38
VPS55P47111 YDL068WYDL068W 330 nt0.18□□□□□ -2.38
VPS55P47111 TIM8YJR135W-A 264 nt0.18□□□□□ -2.38
VPS55P47111 SPC2YML055W 537 nt0.18□□□□□ -2.38
VPS55P47111 YPR170CYPR170C 336 nt0.18□□□□□ -2.38
VPS55P47111 YPR172WYPR172W 603 nt0.18□□□□□ -2.38
VPS55P47111 YBL100W-BYBL100W-B 5313 nt0.18□□□□□ -2.38
VPS55P47111 YGR042WYGR042W 816 nt0.17□□□□□ -2.38
VPS55P47111 YHR028W-AYHR028W-A 321 nt0.17□□□□□ -2.38
VPS55P47111 PSF2YJL072C 642 nt0.17□□□□□ -2.38
VPS55P47111 YJL086CYJL086C 369 nt0.17□□□□□ -2.38
VPS55P47111 PDE2YOR360C 1581 nt0.17□□□□□ -2.38
VPS55P47111 YOP1YPR028W 543 nt0.17□□□□□ -2.38
VPS55P47111 VPS52YDR484W 1926 nt0.17□□□□□ -2.38
VPS55P47111 ZIP1YDR285W 2628 nt0.17□□□□□ -2.38
VPS55P47111 YBL068W-AYBL068W-A 237 nt0.16□□□□□ -2.38
VPS55P47111 snR44snR44 211 nt0.16□□□□□ -2.38
VPS55P47111 SCW11YGL028C 1629 nt0.16□□□□□ -2.38
VPS55P47111 AI5_ALPHAQ0070 1893 nt0.16□□□□□ -2.38
VPS55P47111 KAR1YNL188W 1302 nt0.15□□□□□ -2.38
VPS55P47111 TAD1YGL243W 1203 nt0.15□□□□□ -2.39
VPS55P47111 SWI5YDR146C 2130 nt0.14□□□□□ -2.39
VPS55P47111 BEM3YPL115C 3387 nt0.14□□□□□ -2.39
VPS55P47111 ATC1YDR184C 885 nt0.14□□□□□ -2.39
VPS55P47111 YER078W-AYER078W-A 165 nt0.14□□□□□ -2.39
VPS55P47111 RPS24BYIL069C 408 nt0.14□□□□□ -2.39
VPS55P47111 SPR2YOR214C 711 nt0.14□□□□□ -2.39
VPS55P47111 CHS6YJL099W 2241 nt0.14□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms